XLOC_036455


Basic Information

Item Value
gene id XLOC_036455
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 24780407 ~ 24780988 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072461
taataaagggactaagccaaaaaaatttaatatgagtaaattgtattttttgggtgaactgtccctttaaaagtgATGCTTGATGATCTTCAAACTCAAAAATCGACCAGTTTCTTCATTTTAAGATCCTCTCTAGCAAGAATATATGTTGATATTATTTAACCAATGTGCTGATCTGAACTACTTCCAGGAGGACAGAGCTGAATGCTGGACGTCTTCAGATCAAACTAAGTGGTTTGTTATTGATTCACTGTCAGAGATCTTTGATTACTTTAAATAAACAAGTGTTTGTAACACATGCAATTAATACTTGTTTTATATTCTGTGTTTTTGGTGTTCAGAGAACAGCAGTGTTGCATTGTGGGTACCCATCAGTGGTAAAACAGAAATTTGAGCCTTGAAGACACTATTTTGTAAGtacttatttttttgcacatacTTTTTAGAAACAAAGGTCACAGTAATTCCCCTGAAAGCTGATTTCTTGTAATAACTAGTGTGTAATATATTGTCATATTAAATGAATGTCTGGAAATGTGTGTACTATATTCAGTTTGCTCAATAAAGATATTTTTCACACCA

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0043226 organelle cellular_component
GO:0043227 membrane-bounded organelle cellular_component
GO:0043229 intracellular organelle cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko05169 Epstein-Barr virus infection
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072461 True 582 lncRNA 0.32 1 24780407 24780988

Neighbor

gene id symbol gene type direction distance location
XLOC_036454 prok1 coding downstream 50222 24714733 ~ 24730185 (-)
XLOC_036453 BX324132.4 coding downstream 82821 24500116 ~ 24697586 (-)
XLOC_036451 BX296549.1 coding downstream 277410 24422393 ~ 24502997 (-)
XLOC_036450 NA coding downstream 282413 24419950 ~ 24497994 (-)
XLOC_036452 NA coding downstream 305312 24441528 ~ 24475095 (-)
XLOC_036456 rbm15 coding upstream 7511 24788499 ~ 24791060 (-)
XLOC_036457 BX324132.3 coding upstream 18700 24799688 ~ 24803111 (-)
XLOC_036458 NA coding upstream 75998 24856986 ~ 24909039 (-)
XLOC_036459 kcnc4 coding upstream 147644 24928632 ~ 24965308 (-)
XLOC_036460 hspa1b coding upstream 187110 24968098 ~ 24970790 (-)
XLOC_036447 NA non-coding downstream 202839 24325248 ~ 24577568 (-)
XLOC_036446 NA non-coding downstream 482737 24297371 ~ 24297670 (-)
XLOC_036444 NA non-coding downstream 564585 24192699 ~ 24215822 (-)
XLOC_036468 NA non-coding upstream 614118 25395106 ~ 25396501 (-)
XLOC_036474 BX544876.1 non-coding upstream 950024 25731012 ~ 25734935 (-)
XLOC_036481 NA non-coding upstream 1338235 26119223 ~ 26326501 (-)
XLOC_036482 NA non-coding upstream 1434696 26215684 ~ 26229796 (-)

Expression


Co-expression Network