XLOC_036474 (BX544876.1)


Basic Information

Item Value
gene id XLOC_036474
gene name BX544876.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 25731012 ~ 25734935 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071276
AGCTCTGGCTTCTCCGCCGCGCAGGTCTGGACCGAGTCTTCATCATAAGACTGTAGGAGAGTTACCGAATAATTCCTTCCAGAGTTGTTCGCCCAAAACTCTCCATCTGACGTCTCATATCGAACAACAAAATCAATGCGTGCTCCGTTGAACAAGTACGGCGGAGCAAAGGACAGCTTCACGGAGAACTTGTCCGTTTCGCCGTCGTTTGAGTCCTGGACGTACTCGGCTGGGTAATCAAAGTGATTGATCCAACCGTCCATAGTCGACCTGACATAGACTGATTTGTGAAAAGAAATGTTAAGCACACGAATGACCACGTCGAAGGATAGAGGCTCGTCTGGCACAGGTGTCACGCTGTCCACCTCCAGCTTGTTGGTGTGGACCGCGAGTAAAAGCTCCGGGCCGGTGAGCACCTGGAACTCCGGCCACAGACGGTTTGCTGAAAAATCAAAAAGATTGAAAAAAGGAGACTATGATGGAGATTGCAGTTggtaaagctttttttatttctgtcaggTATTGTATTAGAGATTAATCTTGATTAACCATAATAAAGAATACTCATATTTATCAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094262

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071276 True 577 lncRNA 0.46 2 25731012 25734935

Neighbor

gene id symbol gene type direction distance location
XLOC_036473 foxp3a coding downstream 1469 25716308 ~ 25729543 (-)
XLOC_036472 tspy coding downstream 14938 25708067 ~ 25716074 (-)
XLOC_036471 sema3ga coding downstream 23591 25650229 ~ 25707421 (-)
XLOC_036470 stk38a coding downstream 125475 25590841 ~ 25605537 (-)
XLOC_036469 prex1 coding downstream 161092 25423133 ~ 25569920 (-)
XLOC_036475 suv39h1b coding upstream 16028 25750963 ~ 25811172 (-)
XLOC_036476 taf10 coding upstream 76957 25811892 ~ 25817106 (-)
XLOC_036477 efhd2 coding upstream 83687 25818622 ~ 25846188 (-)
XLOC_036478 opn7c coding upstream 123289 25858224 ~ 25874426 (-)
XLOC_036479 si:dkey-72l14.3 coding upstream 238216 25973151 ~ 25980694 (-)
XLOC_036468 NA non-coding downstream 334511 25395106 ~ 25396501 (-)
XLOC_036458 NA non-coding downstream 821973 24856986 ~ 24909039 (-)
XLOC_036455 NA non-coding downstream 950024 24780407 ~ 24780988 (-)
XLOC_036450 NA non-coding downstream 1233018 24419950 ~ 24497994 (-)
XLOC_036481 NA non-coding upstream 384288 26119223 ~ 26326501 (-)
XLOC_036482 NA non-coding upstream 480749 26215684 ~ 26229796 (-)
XLOC_036483 NA non-coding upstream 594318 26329253 ~ 26368366 (-)
XLOC_036486 NA non-coding upstream 950894 26685829 ~ 26700335 (-)
XLOC_036491 NA non-coding upstream 1232501 26967436 ~ 26971126 (-)
XLOC_036447 NA non-coding downstream 1153444 24325248 ~ 24577568 (-)

Expression


Co-expression Network