XLOC_036685


Basic Information

Item Value
gene id XLOC_036685
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 44457119 ~ 44457658 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072513
CCCTCACTCCTCTCACTGGAGCAGTTGTTGAAGGTATTGAAGAAATGAATAGCAGAATAGCAAAACGCAATGTAaagcacacaatacacacacacacacacacacacacacacacagtcttatttgggagatttgagattgtttGAAGGGTTGAGGGTGAAAAagatttaaatgtgcaaatgcctgtgaaacagactgaGAATCTGGCTGAGGCAAAGGCGTCAGAGGAGAACAAGCTGAAAGCGGTGATGTACCAGTCCAGCCTGTGCTACTACTCCAGCAGGTGAGCGTTCAGATACTGACAGGTTTGCTTTGAGAGAAATGTCTGAGCTGATTTTCTTGGTTCTGATATTCATGGCCATGAAGCTGCTTGGGATCCCGAGACACCACATTAGGCACTGCCCCACTAATGTGGTAACTGGGGTTTCCAAGCTCACGGTTGCTGTGAACTTGAGCTCTTGTCCTCATCAGTCAGATTGTTTGCTCAGAGTTTGACTGTCACTCCTCAATTCACAGGGCAGCGGCTCTGCTCCGCACAAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072513 True 540 lncRNA 0.47 1 44457119 44457658

Neighbor

gene id symbol gene type direction distance location
XLOC_036684 si:busm1-228j01.6 coding downstream 78709 44373764 ~ 44378410 (-)
XLOC_036683 si:busm1-228j01.4 coding downstream 93523 44362452 ~ 44363596 (-)
XLOC_036682 CU914776.1 coding downstream 112377 44340504 ~ 44344742 (-)
XLOC_036680 piwil1 coding downstream 157835 44224693 ~ 44299284 (-)
XLOC_036681 fzd10 coding downstream 158155 44295983 ~ 44298964 (-)
XLOC_036686 mhc1lba coding upstream 4941 44462599 ~ 44463985 (-)
XLOC_036687 NA coding upstream 25659 44483317 ~ 44483928 (-)
XLOC_036688 rsph14 coding upstream 109050 44566708 ~ 44586985 (-)
XLOC_036689 bag4 coding upstream 141747 44599405 ~ 44611357 (-)
XLOC_036690 NA coding upstream 282444 44740102 ~ 44746968 (-)
XLOC_036678 CR933103.1 non-coding downstream 416206 44040796 ~ 44040913 (-)
XLOC_036676 AL808129.1 non-coding downstream 516942 43934595 ~ 43940177 (-)
XLOC_036669 NA non-coding downstream 1384696 43059687 ~ 43072423 (-)
XLOC_036668 CU914617.1 non-coding downstream 1552477 42860031 ~ 42904642 (-)
XLOC_036695 NA non-coding upstream 577611 45035269 ~ 45037776 (-)
XLOC_036696 NA non-coding upstream 743193 45200851 ~ 45202970 (-)
XLOC_036699 CU695141.1 non-coding upstream 953923 45411581 ~ 45411745 (-)

Expression


Co-expression Network