XLOC_036695


Basic Information

Item Value
gene id XLOC_036695
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 45035269 ~ 45037776 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071655
AGAGCTGATCACACGCATAtatttgtcttgtgtttattCCACCATTTAACAGGTAGAAGTGCCCAGAATGACTCACGCACACATACCGATTCTGGACCTGCGGATGAAATGTTGCTCCGTTTTACAATGTCTCACTGTGGCGGGAAGAAGCACTAAATGAGCTCTAAGTCGGGGACATCATTGAGCTCAGTCacctaaaaataaacacaagACCAGATGGAAGAGGAAAATTTGACTTATCCAATCACACAACTTTTAAGcttATTGATAGGCATATCCAGGAGGCAGTTCTTGAGATCATTGCAGTGTTAGAAATGCCCAATAAGCTCATCCTCCTGGACAGCCATATGGATGAATACATAGTGCCTGTACATTTCTATGCAGGTACTATTAAGTGGCTGGCAAACCAGCTCCCTCTTCAGTTAAAACTCAGGTACATCTGTGTAAGCGTCCTCCACAAGGAACCTGCCGATCAGGTCCCATGGAGGATCTGCTGACCCCGATCAGGTTCATCCAAAAGACATTCAGGACCCAATGGACTGCATTTTCTATTGTTTGTAAAGAAAAGTTCAAGGGATGTTCATTAAACTTTCACCTAGTGTTGGGCGATATGCCGAATTTTCAGATCGCCCATATTGTCCACTTGTGAGATCGCCAATACACGATTATATCGCATGGGGGCGGGGCTGTTCAGTACAAAAGTTTCTtctcatatatttattaaacggtaTTTATTATTTCCCTAA
>TCONS_00072517
CTGCTCGATAGCCCTGTAACATGGAGAGCTGATCACACGCATAtatttgtcttgtgtttattCCACCATTTAACAGGTTAGTTGACTGTTCTAAGTGTCAATCTGTATTGATATGGAAAGAATACATGTTTGTGCATATTAAGTCTTAGGAAAAGATTTGTGTTTGATTACATTTACATGTTTAATGAGGGTTTACCCGCGATTTAAGGGGATTTATATCTactcaaatagtttaataaaggTGAATATGCTTGTATATACATGTATTTCAGTTCTAATAATGTTTAGTTTGCTTTAAAAAGTGCATGTGAGTGATCTATATGGGCAAAACATTCAGAGAATGTcaagtttaaagcatttttggTACAGATAAAAGCcaattaagttaatttgattcatgtGACACTGAATAGTGTGTGAATACAGATGTACTACACAGCCATTGGCTGATGAATATATTTGTCAAAGAAATGCTGTTTATTAAGGAGGCTGAAACAGtcaatatgtatatacagtaaatgCTATAGCAATGTATTTTAGATATTGCAAGTCTTGCCATTTGAATTTGATGTGAACATGTTGAGAGAAAAAAAGATAGCCCAGTGACATGGAGGGCTGTTCACACGTATAtatttgtcttgtgtttattCCACCATTTTAACAGATTGCTGGGATCGCTAAACTGTCAGCTGATACAGGAGTCCTGGACCCACTACACAAGTTTTGCCAATGTTGACATTTCAAATCACCAAAACAAAAAGTCTGACTCAGTGTCAGTGAAGTCCTGTGTCAGGTTAAAAAAAGCCACTATATTATGATACTTACCTGTGTGTCATTTTCCAGGTAGAAGTGCCCAGAATGACTCACGCACACATACCGATTCTGGACCTGCGGATGAAATGTTGCTCCGTTTTACAATGTCTCACTGTGGCGGGAAGAAGCACTAAATGAGCTCTAAGTCGGGGACATCATTGAGCTCAGTCacctaaaaataaacacaagACCAGATGGAAGAGGAAAATTTGACTTATCCAATCACACAACTTTTAAGGTGCACatcactcatccacacacatttaaaattgttAGCCtccaagagaaagaaaaaattatttagaaGTAAAATTATATGAAATTGTTGCCTTAATAATGATTACAGTAGTGTCAGAAGTAGTGAATAAAACACATCACAGAAGGCTGTTTGATGCAAATGaccaaagtacaaataaaacttttacttagtttttttttttttttcattgaataaCTTATTGGAAAATgtattattagaaaaaaatatttttctcctAATAAAATGTAGAACatctgtgtaggtatagtgtttccacagtcaaataaatgtgcaacgtgatgtaggaggaTTAAAACAACCACTCACCTTCTGTGACCATCTGcacctcaaaaatgtttttttcaagtttaaatacatttttaaaacagtgcatgtctgTAATAAAGAAATCGCTAAATGCATCACCACAAACCCATAGTGTCTgtacaattataaaatatttttccccagtttgaggatgttaaatcaggtgtattttgtacatttacataaCGGATATCCGTACAGCaatggatattaatgtgtatcctgtcacaaaaaacagtgcaaagctaaacacaCGCTGTTAGCATGAGGAATGACATTGTGTGCAactcgttgcagaaaggcttgatgCGCATGTGGGAACAGTAGACGGAGAGAACTAGTTAATCTGTATAAGGCACAAGCAACAAAAACATCTACAGCTCATTACAGCTCAGCTTCAAATTTTCAGAAAAGTATAAATAATCAAATGGGTATTTTGAGCCAAAACTTTACCAATACATTCTGGAGGTACAAAAAGCTTATCCTGAATCTTGAAAAGaggtaaaatatgtgccctttaggATTTAAAAAGATAACTTAATCCACAACGAAAACGGTTACTTTTATCAAATGTAAGTTGAATCTTTTATACTAaccatttttaaattgtttttgtttttcagcttATTGATAGGCATATCCAGGAGGCAGTTCTTGAGATCATTGCAGTGTTAGAAATGCCCAATAAGCTCATCCTCCTGGACAGCCATATGGATGAATACATAGTGCCTGTACATTTCTATGCAGGTACTATTAAGTGGCTGGCAAACCAGCTCCCTCTTCAGTTAAAACTCAGGTACATCTGTGTAAGCGTCCTCCACAAGGAACCTGCCGATCAGGTCCCATGGAGGATCTGCTGACCCCGATCAGGTTCATCCAAAAGACATTCAGGACCCAATGGACTGCATTTTCTATTGTTTGTAAAGAAAAGTTCAAGGGATGTTCATTAAACTTTCACCTAGTGTTGGGCGATATGCCGAATTTTCAGATCGCCCATATTGTCCACTTGTGAGATCGCCAATACACGATTATATCGCATGGGGGCGGGGCTGTTCAGTACAAAAGTTTCTtctcatatatttattaaacggtaTTTATTATTTCCCTAA

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0048513 animal organ development biological_process
GO:0007275 multicellular organism development biological_process
GO:0009888 tissue development biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0048856 anatomical structure development biological_process
GO:0060485 mesenchyme development biological_process
GO:0050767 regulation of neurogenesis biological_process
GO:0097485 neuron projection guidance biological_process
GO:0007399 nervous system development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process
GO:0007411 axon guidance biological_process
GO:0045664 regulation of neuron differentiation biological_process
GO:0060284 regulation of cell development biological_process
GO:0051960 regulation of nervous system development biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071655 False 746 lncRNA 0.43 3 45035269 45037752
TCONS_00072517 True 2508 lncRNA 0.36 1 45035269 45037776

Neighbor

gene id symbol gene type direction distance location
XLOC_036694 timm17b coding downstream 109192 44921123 ~ 44926077 (-)
XLOC_036693 praf2 coding downstream 130546 44893628 ~ 44904723 (-)
XLOC_036692 cacna1fa coding downstream 167249 44850710 ~ 44868020 (-)
XLOC_036691 FO082780.1 coding downstream 199325 44828432 ~ 44835944 (-)
XLOC_036690 NA coding downstream 288301 44740102 ~ 44746968 (-)
XLOC_036696 NA coding upstream 163075 45200851 ~ 45202970 (-)
XLOC_036697 adamts13 coding upstream 188810 45226586 ~ 45279411 (-)
XLOC_036698 mak16 coding upstream 357138 45394914 ~ 45416187 (-)
XLOC_036699 CU695141.1 coding upstream 373805 45411581 ~ 45411745 (-)
XLOC_036700 ywhabb coding upstream 381209 45418985 ~ 45430942 (-)
XLOC_036687 NA non-coding downstream 551341 44483317 ~ 44483928 (-)
XLOC_036685 NA non-coding downstream 577611 44457119 ~ 44457658 (-)
XLOC_036682 CU914776.1 non-coding downstream 690527 44340504 ~ 44344742 (-)
XLOC_036678 CR933103.1 non-coding downstream 994356 44040796 ~ 44040913 (-)
XLOC_036701 NA non-coding upstream 431218 45468994 ~ 45472217 (-)
XLOC_036716 NA non-coding upstream 1589887 46627663 ~ 46629378 (-)
XLOC_036721 NA non-coding upstream 2052335 47090111 ~ 47093938 (-)

Expression


Co-expression Network