XLOC_036701


Basic Information

Item Value
gene id XLOC_036701
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 45468994 ~ 45472217 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072083
CGACAGTAGGTCTCGGAGTGTATAAGAAGCTCTCCATTCAATTTTTGTTTACCAGCGTCATGTCTTTGCTGATCCTGGTTCTGTCCCTGTCACCAAGTTAAGTACCCACCTGACACTTCACATCACATTGAACCCGACGTTCATGAACTTCAGGTGTGAGGTGTTGAGGATTAATGGATGTGTAGTTTGCCTAGACCTGCATCACATGGGTCCTCATACTTGGAGAAGATCTGGAATATAACTGTCAAAATGAAAGGCTACGGTTTCAGTGCTAACGCTACCGCGTGGTTAACAGATGTTCATTAATTATTGAGACTGAAGTCGAAGATTGGTACCTGTTGTCTCTGCGCCTCTGTCATCCTCAGTGCTTGGATCTGCCAAAATGGAGCACAGCAGTGATGAGTAAGTAAATCAGTTCActcaaatgaataatgaaaattctgtcactatttactcactctttatttATCTAGCACCAGTCTCCTTAGGAATGTCTTGTGTCTGGTAGATCGATGGCAACGTGCTGCCCTTCTCAAGTAGGTACGATTCATGTTATAACAATTTTGTGGGGGAAAAAAGCTTTATATAATGTTAAACAGATGTTTATGTAACGTGAATAGAAAATTATATGtgataaatatgaatgaataaacgaaac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072083 True 658 lncRNA 0.40 3 45468994 45472217

Neighbor

gene id symbol gene type direction distance location
XLOC_036700 ywhabb coding downstream 38052 45418985 ~ 45430942 (-)
XLOC_036698 mak16 coding downstream 52807 45394914 ~ 45416187 (-)
XLOC_036699 CU695141.1 coding downstream 57249 45411581 ~ 45411745 (-)
XLOC_036697 adamts13 coding downstream 189583 45226586 ~ 45279411 (-)
XLOC_036696 NA coding downstream 266024 45200851 ~ 45202970 (-)
XLOC_036702 SLC18A1 coding upstream 236350 45708567 ~ 45729758 (-)
XLOC_036703 ppiaa coding upstream 282654 45754871 ~ 45760087 (-)
XLOC_036704 ogdha coding upstream 290267 45762484 ~ 45838481 (-)
XLOC_036705 adam9 coding upstream 377922 45850139 ~ 45939691 (-)
XLOC_036706 fam160b2 coding upstream 489400 45961617 ~ 46005359 (-)
XLOC_036695 NA non-coding downstream 431218 45035269 ~ 45037776 (-)
XLOC_036690 NA non-coding downstream 722026 44740102 ~ 44746968 (-)
XLOC_036687 NA non-coding downstream 985066 44483317 ~ 44483928 (-)
XLOC_036716 NA non-coding upstream 1155446 46627663 ~ 46629378 (-)
XLOC_036721 NA non-coding upstream 1617894 47090111 ~ 47093938 (-)
XLOC_036724 NA non-coding upstream 1726417 47198634 ~ 47199165 (-)
XLOC_036726 NA non-coding upstream 1784761 47256978 ~ 47258976 (-)
XLOC_036727 CR792439.2 non-coding upstream 1803079 47275296 ~ 47275410 (-)

Expression


Co-expression Network