XLOC_036738 (pimr182)


Basic Information

Item Value
gene id XLOC_036738
gene name pimr182
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 48703005 ~ 48704688 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071732
CCACAGCGACATCAAGCCGCAAAACGTGCTCATCAACCCCCACACCTTCCAGATCAAGCTAATAGACTTTGGTGTTGGTAGAATCATGACCAGCGAAGGCTATTCAACATTCGGTGgcACACAGGCTTATGCTCCTCCGGAGTTTTCTGATTGTAAAAAGTTCCACGCCAAGCCTGCAACGGTGTACTCTATAGGTATAATGTTGTACAGGCTGCTGCACAGAAAATCCCCTCACAGAGAGCTCATTGAGATTGTCGCCAGAACCTGGGAGCGTGACAGACTATCCAAAGAATGCATCGACATGATCTGTTCCTGTCTGCAAAGAAATCCGCGACAGCGGATTCCTCTTGAAGAGATCCTCCACCATAACTGGTTCCAGGTCTTGATCCTGAAGCCAAGCAAAGAGAAGAAAAccttaaaagaaaaaatacagtCTATATTGAAATTCAGATAACAGCACAGCTGAAGAAGATCCTGGGACATGAAGAAGATTACACCAAGCTCCTTCTCTTCATCCAGCTACTAACACCAAACTCCTCCTCTTCATCGAGCAACCTAACACCAAACTCCTCCTCTTCATCGAGCAACCTAACACCAAGCTCC
>TCONS_00071733
ACCATATGAGAAGACTGTTCCACTAGAGGTCGGATTGATGTATTTGGTGAGCACAGGTCCTTACGTTCCTCAAATAATACAGCTGCTGGATTGGTATGAGACGCCGAGCCAGTACACACTGGTGCTGGAGCGTCCCAATTCCTGCATGGACCTGCAAAAGTTTGCATGGAAGCATcgcaagaaaatgactgaatcgGTAGTACGATTGGTGATGCACCAGGTGGTCACTGCTGCAATTGCATGCTGTGAAATGAACGTTTACCACAGCGACATCAAGCCGCAAAACGTGCTCATCAACCCCCACACCTTCCAGATCAAGCTAATAGACTTTGGTGTTGGTAGAATCATGACCAGCGAAGGCTATTCAACATTCGGTGgcACACAGGCTTATGCTCCTCCGGAGTTTTCTGATTGTAAAAAGTTCCACGCCAAGCCTGCAACGGTGTACTCTATAGGTATAATGTTGTACAGGCTGCTGCACAGAAAATCCCCTCACAGAGAGCTCATTGAGATTGTCGCCAGAACCTGGGAGCGTGACAGACTATCCAAAGAATGCATCGACATGATCTGTTCCTGTCTGCAAAGAAATCCGCGACAGCGGATTCCTCTTGAAGAGATCCTCCACCATAACTGGTTCCAGGTCTTGATCCTGAAGCCAAGCAAAGAGAAGAAAAccttaaaagaaaaaatacagtCTATATTGAAATTCAGGTCAgtttaataacaacaaaaacccCGACATGACTcctgaaatgtacaaaat
>TCONS_00071734
ATGTCCTTCATTATTTGTTTCACTGATTTTTTTACAGGTGACATCAATGACGAATATCGAGTCAAAGGGATTATAGGTCGTGGAGGGTTTGGAGCTGTCTGTGCTGGAGTTCGTCGGTCGGATTCACGAAAGGTGGCAATCAAAAATGTGAGCAAGACTGAAGCAAGAAGAACCTTGAAGATTCTACCATATGAGAAGACTGTTCCACTAGAGGTCGGATTGATGTATTTGGTGAGCACAGGTCCTTACGTTCCTCAAATAATACAGCTGCTGGATTGGTATGAGACGCCGAGCCAGTACACACTGGTGCTGGAGCGTCCCAATTCCTGCATGGACCTGCAAAAGTTTGCATGGAAGCATcgcaagaaaatgactgaatcgGTAGTACGATTGGTGATGCACCAGGTGGTCACTGCTGCAATTGCATGCTGTGAAATGAACGTTTACCACAGCGACATCAAGCCGCAAAACGTGCTCATCAACCCCCACACCTTCCAGATCAAGCTAATAGACTTTGGTGTTGGTAGAATCATGACCAGCGAAGGCTATTCAACATTCGGTGgcACACAGGCTTATGCTCCTCCGGAGTTTTCTGATTGTAAAAAGTTCCACGCCAAGCCTGCAACGGTGTACTCTATAGGTATAATGTTGTACAGGCTGCTGCACAGAAAATCCCCTCACAGAGAGCTCATTGAGATTGTCGCCAGAACCTGGGAGCGTGACAGACTATCCAAAGAATGCATCGACATGATCTGTTCCTGTCTGCAAAGAAATCCGCGACAGCGGATTCCTCTTGAAGAGATCCTCCACCATAACTGGTTCCAGGTCTTGATCCTGAAGCCAAGCAAAGAGAAGAAAAccttaaaagaaaaaatacagtCTATATTGAAATTCAGGTCAgtttaa

Function

symbol description
pimr182 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000102529

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071732 False 603 mRNA 0.46 4 48703005 48704050
TCONS_00071733 False 763 mRNA 0.46 3 48703320 48704311
TCONS_00071734 True 906 mRNA 0.46 5 48703362 48704688

Neighbor

gene id symbol gene type direction distance location
XLOC_036737 pimr183 coding downstream 27230 48673596 ~ 48675775 (-)
XLOC_036736 clcn6 coding downstream 33878 48629495 ~ 48669127 (-)
XLOC_036735 NA coding downstream 154913 48546053 ~ 48548092 (-)
XLOC_036734 NA coding downstream 533669 48168900 ~ 48169336 (-)
XLOC_036733 NA coding downstream 544252 48092795 ~ 48158753 (-)
XLOC_036739 pimr180 coding upstream 35302 48739990 ~ 48741106 (-)
XLOC_036740 pimr181 coding upstream 50207 48754895 ~ 48756201 (-)
XLOC_036741 pimr184 coding upstream 64185 48768873 ~ 48770603 (-)
XLOC_036742 BX323556.1 coding upstream 74273 48778961 ~ 48790587 (-)
XLOC_036743 NA coding upstream 90770 48795458 ~ 48798032 (-)
XLOC_036730 LO017720.1 non-coding downstream 1197004 47505885 ~ 47506001 (-)
XLOC_036728 NA non-coding downstream 1387779 47302371 ~ 47315226 (-)
XLOC_036745 NA non-coding upstream 339056 49043744 ~ 49065039 (-)
XLOC_036746 CT737131.1 non-coding upstream 445216 49149904 ~ 49152475 (-)
XLOC_036761 NA non-coding upstream 1099300 49803988 ~ 49825917 (-)

Expression


Co-expression Network