XLOC_036739 (pimr180)


Basic Information

Item Value
gene id XLOC_036739
gene name pimr180
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 48739990 ~ 48741106 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071735
CCACAGCGACATCAAGCCAGAAAACGTGCTCATCAACCCCCACACCTTCCAGATCAAGCTAATAGACTTTGGTGTTGGTAGAATCATGAACAGCGAAGGCTATTCAACATTCTGTGgcACAAAGCCTTATGCTCCTCCAGAGTTTTCTGATTGTAAAAAGTTCCACGCCAAGCCTGCAACGGTGTACTCTATAGGTGTAATGTTGTACAGGCTGCTGCACAGAAAATACCCTCGAAGAGAGCTCACTAAGATTGTCGCCAGAACCTGGGAGCGTGACAAACTATCCAAAGAATGCATCGACATGATCTGTTCCTGTCTGCAAAGAGATCCACAACAGCGGATTCCTCTTGAAGAGATCCTCCAGCATAACTGGTTCCAGGTCTTGATCCTGAAGCCAAGCAAAGAGAAGAAAAccttaaaagaaaaaatacagtCTATATTGAAATTCAGATAACAGCACAGCTGAAGAAGATCCTGGGACATGAAGAAGATTACACCAAGCTCCTTCTCTTCATCCAGCTACTAACACCAAACTCCTCCTCTTCATCGAGCAACCTAACACCAAACTCCTCCTCTTCATCGAGCAACCTAACACCAAGCTCC
>TCONS_00071736
CCAGTACACACTGGTGCTGGAGAGTCCCAATTCCTGCATGGACCTGCAAACGTTTGCATGGAAGCATCGTAAGAAAATGACTGAATCGGTAGCACGATTGGTGATGCACCAGGTGGTCGCTGCTGCAATTGAATGCTGTGAAAGGGACGTTTACCACAGCGACATCAAGCCAGAAAACGTGCTCATCAACCCCCACACCTTCCAGATCAAGCTAATAGACTTTGGTGTTGGTAGAATCATGAACAGCGAAGGCTATTCAACATTCTGTGgcACAAAGCCTTATGCTCCTCCAGAGTTTTCTGATTGTAAAAAGTTCCACGCCAAGCCTGCAACGGTGTACTCTATAGGTGTAATGTTGTACAGGCTGCTGCACAGAAAATACCCTCGAAGAGAGCTCACTAAGATTGTCGCCAGAACCTGGGAGCGTGACAAACTATCCAAAGAATGCATCGACATGATCTGTTCCTGTCTGCAAAGAGATCCACAACAGCGGATTCCTCTTGAAGAGATCCTCCAGCATAACTGGTTCCAGGTCTTGATCCTGAAGCCAAGCAAAGAGAAGAAAAccttaaaagaaaaaatacagtCTATATTGAAATTCAGGTCAgtttaataacaacaaaaacccAGACATGACTcctgaaatgtacaaaat

Function

symbol description
pimr180 Predicted to enable ATP binding activity and protein kinase activity. Predicted to act upstream of or within protein phosphorylation.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000068145

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071735 False 603 mRNA 0.45 4 48739990 48740953
TCONS_00071736 True 655 mRNA 0.45 3 48740223 48741106

Neighbor

gene id symbol gene type direction distance location
XLOC_036738 pimr182 coding downstream 35302 48703005 ~ 48704688 (-)
XLOC_036737 pimr183 coding downstream 64215 48673596 ~ 48675775 (-)
XLOC_036736 clcn6 coding downstream 70863 48629495 ~ 48669127 (-)
XLOC_036735 NA coding downstream 191898 48546053 ~ 48548092 (-)
XLOC_036734 NA coding downstream 570654 48168900 ~ 48169336 (-)
XLOC_036740 pimr181 coding upstream 13789 48754895 ~ 48756201 (-)
XLOC_036741 pimr184 coding upstream 27767 48768873 ~ 48770603 (-)
XLOC_036742 BX323556.1 coding upstream 37855 48778961 ~ 48790587 (-)
XLOC_036743 NA coding upstream 54352 48795458 ~ 48798032 (-)
XLOC_036744 wrap73 coding upstream 74976 48816082 ~ 48847772 (-)
XLOC_036733 NA non-coding downstream 581237 48092795 ~ 48158753 (-)
XLOC_036730 LO017720.1 non-coding downstream 1233989 47505885 ~ 47506001 (-)
XLOC_036728 NA non-coding downstream 1424764 47302371 ~ 47315226 (-)
XLOC_036745 NA non-coding upstream 302638 49043744 ~ 49065039 (-)
XLOC_036746 CT737131.1 non-coding upstream 408798 49149904 ~ 49152475 (-)
XLOC_036761 NA non-coding upstream 1062882 49803988 ~ 49825917 (-)

Expression


Co-expression Network