G1753058


Basic Information

Item Value
gene id G1753058
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 54927746 ~ 54928026 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2007197
gggttaagtcatttgctcaagggcacatcaacagatttttcacctagtcggctctgggattttGAACCAgcgacttttcggttactggcccaacgctcttaaccgctaggctacctgtcacacAACAAATCCACATTTAATGAATTGCTTCTATCAGTATCTCTTGAGTGTTTTAATTTCTTACCATCAGACAAGCGACCAGTAGTGAATCACAAATCTCTGTGGTTGACAAATTTTGCCCCTCAGTCTGTGACACTAATGACATTGGCTGTCAATCACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2007197 True 281 lncRNA 0.43 1 54927746 54928026

Neighbor

gene id symbol gene type direction distance location
LOC110500891 afap1 coding upstream 419469 54349344 ~ 54508277 (+)
LOC110500735 ablim2 coding upstream 585165 54206483 ~ 54342581 (+)
si:dkey-219e21.4 LOC106608570 coding upstream 724844 54199722 ~ 54202902 (+)
LOC110500729 md2l1 coding upstream 857203 54067452 ~ 54070543 (+)
LOC118942947 NA coding upstream 1154421 53769687 ~ 53773325 (+)
LOC110500744 grpel1 coding downstream 27521 54955547 ~ 54960002 (+)
ccdc96 ccdc96 coding downstream 38208 54966234 ~ 54968068 (+)
LOC110500741 LOC106595343 coding downstream 54766 54982792 ~ 54986995 (+)
smim20 NA coding downstream 203942 55131968 ~ 55133176 (+)
LOC110500752 NA coding downstream 214198 55142224 ~ 55148988 (+)
G1753045 NA non-coding upstream 14595 54912895 ~ 54913151 (+)
G1753023 NA non-coding upstream 15772 54862839 ~ 54911974 (+)
G1752989 NA non-coding upstream 61546 54838289 ~ 54866200 (+)
G1752982 NA non-coding upstream 146247 54781219 ~ 54781499 (+)
G1752975 NA non-coding upstream 162253 54763909 ~ 54765493 (+)
G1753074 NA non-coding downstream 24905 54952931 ~ 54953181 (+)
G1753096 NA non-coding downstream 69930 54997956 ~ 55006936 (+)
G1753114 NA non-coding downstream 114859 55042885 ~ 55043313 (+)
G1753144 NA non-coding downstream 142905 55070931 ~ 55071130 (+)
G1753124 NA non-coding downstream 143531 55071557 ~ 55074587 (+)
LOC110500722 NA other upstream 1671145 53251413 ~ 53256660 (+)
G1751699 LOC106608599 other upstream 1955363 52962449 ~ 52972383 (+)
G1750050 NA other upstream 2730739 52191200 ~ 52197007 (+)
G1750030 LOC106608688 other upstream 2832641 52094709 ~ 52095105 (+)
G1753100 NA other downstream 73553 55001579 ~ 55011678 (+)
LOC110500754 LOC106591080 other downstream 662579 55590450 ~ 55592100 (+)
G1755158 NA other downstream 1458381 56386407 ~ 56387622 (+)
G1755570 NA other downstream 1865705 56793731 ~ 56794574 (+)
G1756789 NA other downstream 2998454 57926480 ~ 57928244 (+)

Expression


Co-expression Network