G1753144


Basic Information

Item Value
gene id G1753144
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 55070931 ~ 55071130 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2007329
AAATTAAACTAGGAAGCCAGGTGACAATGAAACAGGTTTGTTAAGATGTCTCTGCATGAGTATTCGCTATTCTGTAATCGAAAATACCATACATTTTCCATTCACTTAATCTTACAAATATCCAGAACTTAAGAGTCAGCATCACTTCATGACCAAATCATTCATCTACTTCAGTTTAGAAATTCAAGAACATATACACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2007329 True 200 lncRNA 0.33 1 55070931 55071130

Neighbor

gene id symbol gene type direction distance location
LOC110500741 LOC106595343 coding upstream 83936 54982792 ~ 54986995 (+)
ccdc96 ccdc96 coding upstream 102863 54966234 ~ 54968068 (+)
LOC110500744 grpel1 coding upstream 110929 54955547 ~ 54960002 (+)
LOC110500891 afap1 coding upstream 562654 54349344 ~ 54508277 (+)
LOC110500735 ablim2 coding upstream 728350 54206483 ~ 54342581 (+)
smim20 NA coding downstream 60838 55131968 ~ 55133176 (+)
LOC110500752 NA coding downstream 71094 55142224 ~ 55148988 (+)
LOC110500894 rbpj coding downstream 99246 55170376 ~ 55268660 (+)
LOC110500895 LOC106577483 coding downstream 278785 55349915 ~ 55429706 (+)
LOC118942953 NA coding downstream 384927 55456057 ~ 55473044 (+)
G1753114 NA non-coding upstream 27618 55042885 ~ 55043313 (+)
G1753096 NA non-coding upstream 63995 54997956 ~ 55006936 (+)
G1753074 NA non-coding upstream 117750 54952931 ~ 54953181 (+)
G1753058 NA non-coding upstream 142905 54927746 ~ 54928026 (+)
G1753045 NA non-coding upstream 157780 54912895 ~ 54913151 (+)
G1753124 NA non-coding downstream 427 55071557 ~ 55074587 (+)
G1753145 NA non-coding downstream 8163 55079293 ~ 55094050 (+)
G1753155 NA non-coding downstream 23622 55094752 ~ 55094964 (+)
G1753157 NA non-coding downstream 24607 55095737 ~ 55104444 (+)
G1753165 NA non-coding downstream 34113 55105243 ~ 55105629 (+)
G1753100 NA other upstream 59253 55001579 ~ 55011678 (+)
LOC110500722 NA other upstream 1814330 53251413 ~ 53256660 (+)
G1751699 LOC106608599 other upstream 2098548 52962449 ~ 52972383 (+)
G1750050 NA other upstream 2873924 52191200 ~ 52197007 (+)
LOC110500754 LOC106591080 other downstream 519475 55590450 ~ 55592100 (+)
G1755158 NA other downstream 1315277 56386407 ~ 56387622 (+)
G1755570 NA other downstream 1722601 56793731 ~ 56794574 (+)
G1756789 NA other downstream 2855350 57926480 ~ 57928244 (+)
rwdd rwdd4 other downstream 3334154 58405236 ~ 58411726 (+)

Expression


Co-expression Network