G1754601


Basic Information

Item Value
gene id G1754601
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 55772913 ~ 55773150 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2009085
ctttgagactggtgttttgcgggtactatttaatgaagctgccagttgaggacttgtgaggggtctgtttctcaaactagacactctaatgtacttgtactcttgctcagttgtgcaccggggcctcccactcctctttctattctggttagagacagtttgcgctgttctgtgaagggagtagtatacagcgttgtacgatatcttcagtttcttggcaatttctcacatggaatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2009085 True 238 lncRNA 0.45 1 55772913 55773150

Neighbor

gene id symbol gene type direction distance location
LOC118942793 LOC106608538 coding upstream 178251 55592334 ~ 55594662 (+)
LOC110500754 LOC106591080 coding upstream 180813 55590450 ~ 55592100 (+)
LOC118936467 LOC106591080 coding upstream 215011 55516569 ~ 55557902 (+)
LOC110500898 LOC106608541 coding upstream 216258 55542858 ~ 55556655 (+)
LOC118942952 NA coding upstream 259961 55511407 ~ 55512952 (+)
LOC110500755 LOC106608544 coding downstream 465379 56238529 ~ 56455028 (+)
LOC118942812 NA coding downstream 1345585 57118735 ~ 57121924 (+)
LOC118942955 NA coding downstream 1438925 57212075 ~ 57232205 (+)
LOC110500761 LOC106608522 coding downstream 1992930 57766080 ~ 57853814 (+)
zgc:194930 LOC106608523 coding downstream 2092822 57865972 ~ 57896896 (+)
G1754482 NA non-coding upstream 107163 55665547 ~ 55665750 (+)
G1754447 NA non-coding upstream 147309 55625402 ~ 55625604 (+)
G1754413 NA non-coding upstream 173925 55598750 ~ 55598988 (+)
G1753304 NA non-coding upstream 332159 55440388 ~ 55440754 (+)
G1754604 NA non-coding downstream 4443 55777593 ~ 55777799 (+)
G1754605 NA non-coding downstream 5339 55778489 ~ 55778731 (+)
G1754621 NA non-coding downstream 25800 55798950 ~ 55799288 (+)
G1754655 NA non-coding downstream 52266 55825416 ~ 55825989 (+)
G1754857 NA non-coding downstream 217873 55991023 ~ 55991288 (+)
G1753100 NA other upstream 761235 55001579 ~ 55011678 (+)
LOC110500735 ablim2 other upstream 1465423 54206483 ~ 54342581 (+)
LOC110500722 NA other upstream 2516312 53251413 ~ 53256660 (+)
G1751699 LOC106608599 other upstream 2800530 52962449 ~ 52972383 (+)
G1755158 NA other downstream 613257 56386407 ~ 56387622 (+)
G1755570 NA other downstream 1020581 56793731 ~ 56794574 (+)
G1756789 NA other downstream 2153330 57926480 ~ 57928244 (+)
rwdd rwdd4 other downstream 2632134 58405236 ~ 58411726 (+)
G1757578 NA other downstream 2909987 58683137 ~ 58686523 (+)

Expression


Co-expression Network