G1754605


Basic Information

Item Value
gene id G1754605
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 55778489 ~ 55778731 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2009089
ctctttctctttctctttctctctctctctctctctctctctctgtctctctctctgtctctctctctctctctctctctctctctctctctgtgtctctctctctctctctctctctctctctctctctctctctctctctgtctctgtctctctctctctctctctctctgtctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctttcaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2009089 True 243 lncRNA 0.49 1 55778489 55778731

Neighbor

gene id symbol gene type direction distance location
LOC118942793 LOC106608538 coding upstream 183827 55592334 ~ 55594662 (+)
LOC110500754 LOC106591080 coding upstream 186389 55590450 ~ 55592100 (+)
LOC118936467 LOC106591080 coding upstream 220587 55516569 ~ 55557902 (+)
LOC110500898 LOC106608541 coding upstream 221834 55542858 ~ 55556655 (+)
LOC118942952 NA coding upstream 265537 55511407 ~ 55512952 (+)
LOC110500755 LOC106608544 coding downstream 459798 56238529 ~ 56455028 (+)
LOC118942812 NA coding downstream 1340004 57118735 ~ 57121924 (+)
LOC118942955 NA coding downstream 1433344 57212075 ~ 57232205 (+)
LOC110500761 LOC106608522 coding downstream 1987349 57766080 ~ 57853814 (+)
zgc:194930 LOC106608523 coding downstream 2087241 57865972 ~ 57896896 (+)
G1754604 NA non-coding upstream 690 55777593 ~ 55777799 (+)
G1754601 NA non-coding upstream 5339 55772913 ~ 55773150 (+)
G1754482 NA non-coding upstream 112739 55665547 ~ 55665750 (+)
G1754447 NA non-coding upstream 152885 55625402 ~ 55625604 (+)
G1754413 NA non-coding upstream 179501 55598750 ~ 55598988 (+)
G1754621 NA non-coding downstream 20219 55798950 ~ 55799288 (+)
G1754655 NA non-coding downstream 46685 55825416 ~ 55825989 (+)
G1754857 NA non-coding downstream 212292 55991023 ~ 55991288 (+)
G1754879 NA non-coding downstream 229667 56008398 ~ 56008614 (+)
G1754998 NA non-coding downstream 336491 56115222 ~ 56115752 (+)
G1753100 NA other upstream 766811 55001579 ~ 55011678 (+)
LOC110500735 ablim2 other upstream 1470999 54206483 ~ 54342581 (+)
LOC110500722 NA other upstream 2521888 53251413 ~ 53256660 (+)
G1751699 LOC106608599 other upstream 2806106 52962449 ~ 52972383 (+)
G1755158 NA other downstream 607676 56386407 ~ 56387622 (+)
G1755570 NA other downstream 1015000 56793731 ~ 56794574 (+)
G1756789 NA other downstream 2147749 57926480 ~ 57928244 (+)
rwdd rwdd4 other downstream 2626553 58405236 ~ 58411726 (+)
G1757578 NA other downstream 2904406 58683137 ~ 58686523 (+)

Expression


Co-expression Network