Gene
RNA
| Item | Value |
|---|---|
| gene id | G1754998 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 56115222 ~ 56115752 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2009517 | False | 397 | lncRNA | 0.38 | 2 | 56115222 | 56115752 |
| TU2009518 | True | 397 | lncRNA | 0.39 | 2 | 56115222 | 56115752 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942793 | LOC106608538 | coding | upstream | 520560 | 55592334 ~ 55594662 (+) |
| LOC110500754 | LOC106591080 | coding | upstream | 523122 | 55590450 ~ 55592100 (+) |
| LOC118936467 | LOC106591080 | coding | upstream | 557320 | 55516569 ~ 55557902 (+) |
| LOC110500898 | LOC106608541 | coding | upstream | 558567 | 55542858 ~ 55556655 (+) |
| LOC118942952 | NA | coding | upstream | 602270 | 55511407 ~ 55512952 (+) |
| LOC110500755 | LOC106608544 | coding | downstream | 122777 | 56238529 ~ 56455028 (+) |
| LOC118942812 | NA | coding | downstream | 1002983 | 57118735 ~ 57121924 (+) |
| LOC118942955 | NA | coding | downstream | 1096323 | 57212075 ~ 57232205 (+) |
| LOC110500761 | LOC106608522 | coding | downstream | 1650328 | 57766080 ~ 57853814 (+) |
| zgc:194930 | LOC106608523 | coding | downstream | 1750220 | 57865972 ~ 57896896 (+) |
| G1754879 | NA | non-coding | upstream | 106608 | 56008398 ~ 56008614 (+) |
| G1754857 | NA | non-coding | upstream | 123934 | 55991023 ~ 55991288 (+) |
| G1754655 | NA | non-coding | upstream | 289233 | 55825416 ~ 55825989 (+) |
| G1754621 | NA | non-coding | upstream | 315934 | 55798950 ~ 55799288 (+) |
| G1754605 | NA | non-coding | upstream | 336491 | 55778489 ~ 55778731 (+) |
| G1755000 | NA | non-coding | downstream | 710 | 56116462 ~ 56116787 (+) |
| G1755014 | NA | non-coding | downstream | 16883 | 56132635 ~ 56132837 (+) |
| G1755018 | NA | non-coding | downstream | 25339 | 56141091 ~ 56142392 (+) |
| G1755046 | NA | non-coding | downstream | 57357 | 56173109 ~ 56173314 (+) |
| G1755047 | NA | non-coding | downstream | 58113 | 56173865 ~ 56174133 (+) |
| G1753100 | NA | other | upstream | 1103544 | 55001579 ~ 55011678 (+) |
| LOC110500735 | ablim2 | other | upstream | 1807732 | 54206483 ~ 54342581 (+) |
| LOC110500722 | NA | other | upstream | 2858621 | 53251413 ~ 53256660 (+) |
| G1751699 | LOC106608599 | other | upstream | 3142839 | 52962449 ~ 52972383 (+) |
| G1755158 | NA | other | downstream | 270655 | 56386407 ~ 56387622 (+) |
| G1755570 | NA | other | downstream | 677979 | 56793731 ~ 56794574 (+) |
| G1756789 | NA | other | downstream | 1810728 | 57926480 ~ 57928244 (+) |
| rwdd | rwdd4 | other | downstream | 2289532 | 58405236 ~ 58411726 (+) |
| G1757578 | NA | other | downstream | 2567385 | 58683137 ~ 58686523 (+) |
