G1754879


Basic Information

Item Value
gene id G1754879
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 56008398 ~ 56008614 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2009391
CAGCAGTTTCCTGGTTGCTTTTGGGGGCTTTAGCCCATTCAAAGTATGTGGTCCAGTAATTATAAAATGTTGTTCTGAGATAGCCCTTATTTTTTCTACTTTTCCTGGCATCTCTTCAAAttatatcaaatcacattttattggtcacatacacatggttagcagatgtaatcgcaagtgtagcgaaatgcttgtgcttctagtttcgacagagcag

Function

NR:

description
LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2009391 True 217 lncRNA 0.39 1 56008398 56008614

Neighbor

gene id symbol gene type direction distance location
LOC118942793 LOC106608538 coding upstream 413736 55592334 ~ 55594662 (+)
LOC110500754 LOC106591080 coding upstream 416298 55590450 ~ 55592100 (+)
LOC118936467 LOC106591080 coding upstream 450496 55516569 ~ 55557902 (+)
LOC110500898 LOC106608541 coding upstream 451743 55542858 ~ 55556655 (+)
LOC118942952 NA coding upstream 495446 55511407 ~ 55512952 (+)
LOC110500755 LOC106608544 coding downstream 229915 56238529 ~ 56455028 (+)
LOC118942812 NA coding downstream 1110121 57118735 ~ 57121924 (+)
LOC118942955 NA coding downstream 1203461 57212075 ~ 57232205 (+)
LOC110500761 LOC106608522 coding downstream 1757466 57766080 ~ 57853814 (+)
zgc:194930 LOC106608523 coding downstream 1857358 57865972 ~ 57896896 (+)
G1754857 NA non-coding upstream 17110 55991023 ~ 55991288 (+)
G1754655 NA non-coding upstream 182409 55825416 ~ 55825989 (+)
G1754621 NA non-coding upstream 209110 55798950 ~ 55799288 (+)
G1754605 NA non-coding upstream 229667 55778489 ~ 55778731 (+)
G1754604 NA non-coding upstream 230599 55777593 ~ 55777799 (+)
G1754998 NA non-coding downstream 106608 56115222 ~ 56115752 (+)
G1755000 NA non-coding downstream 107848 56116462 ~ 56116787 (+)
G1755014 NA non-coding downstream 124021 56132635 ~ 56132837 (+)
G1755018 NA non-coding downstream 132477 56141091 ~ 56142392 (+)
G1755046 NA non-coding downstream 164495 56173109 ~ 56173314 (+)
G1753100 NA other upstream 996720 55001579 ~ 55011678 (+)
LOC110500735 ablim2 other upstream 1700908 54206483 ~ 54342581 (+)
LOC110500722 NA other upstream 2751797 53251413 ~ 53256660 (+)
G1751699 LOC106608599 other upstream 3036015 52962449 ~ 52972383 (+)
G1755158 NA other downstream 377793 56386407 ~ 56387622 (+)
G1755570 NA other downstream 785117 56793731 ~ 56794574 (+)
G1756789 NA other downstream 1917866 57926480 ~ 57928244 (+)
rwdd rwdd4 other downstream 2396670 58405236 ~ 58411726 (+)
G1757578 NA other downstream 2674523 58683137 ~ 58686523 (+)

Expression


Co-expression Network