G1756456


Basic Information

Item Value
gene id G1756456
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 57552568 ~ 57552804 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2011132
AAGTATTAAACACTAACAGGTGGCTGATGAATGCCTAAACAGTCTCCCCCAacgttctctctttttctttctctctctgtcactcctccctctctttttaatgtttacacatttctctctctctccttctatctgcATCTTTacatgttgctctctctctctctttctctctctttttctccctcgttctctctctctcttttcctctctttctcgctctctctgtaccctctctat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2011132 True 237 lncRNA 0.42 1 57552568 57552804

Neighbor

gene id symbol gene type direction distance location
LOC118942955 NA coding upstream 320363 57212075 ~ 57232205 (+)
LOC118942812 NA coding upstream 430644 57118735 ~ 57121924 (+)
LOC110500755 LOC106608544 coding upstream 1097540 56238529 ~ 56455028 (+)
LOC118942793 LOC106608538 coding upstream 1957906 55592334 ~ 55594662 (+)
LOC110500754 LOC106591080 coding upstream 1960468 55590450 ~ 55592100 (+)
LOC110500761 LOC106608522 coding downstream 213276 57766080 ~ 57853814 (+)
zgc:194930 LOC106608523 coding downstream 313168 57865972 ~ 57896896 (+)
per1b LOC106608520 coding downstream 417504 57970308 ~ 57986158 (+)
LOC118942956 NA coding downstream 427979 57980783 ~ 57981771 (+)
pcolceb pcolce coding downstream 443824 57996628 ~ 58020445 (+)
G1756204 NA non-coding upstream 11595 57489334 ~ 57540973 (+)
G1756132 NA non-coding upstream 175574 57356930 ~ 57376994 (+)
G1756113 NA non-coding upstream 228636 57323596 ~ 57323932 (+)
G1756052 NA non-coding upstream 339570 57211366 ~ 57212998 (+)
G1756045 NA non-coding upstream 365894 57186363 ~ 57186674 (+)
G1756458 NA non-coding downstream 4228 57557032 ~ 57557807 (+)
G1756459 NA non-coding downstream 6168 57558972 ~ 57559900 (+)
G1756464 NA non-coding downstream 9772 57562576 ~ 57562859 (+)
G1756486 NA non-coding downstream 36106 57588910 ~ 57589201 (+)
G1756526 NA non-coding downstream 117992 57670796 ~ 57672903 (+)
G1755570 NA other upstream 757994 56793731 ~ 56794574 (+)
G1755158 NA other upstream 1164946 56386407 ~ 56387622 (+)
G1753100 NA other upstream 2540890 55001579 ~ 55011678 (+)
LOC110500735 ablim2 other upstream 3245078 54206483 ~ 54342581 (+)
G1756789 NA other downstream 373676 57926480 ~ 57928244 (+)
rwdd rwdd4 other downstream 852480 58405236 ~ 58411726 (+)
G1757578 NA other downstream 1130333 58683137 ~ 58686523 (+)
G1758801 NA other downstream 2769411 60322215 ~ 60326620 (+)
G1758818 NA other downstream 2798842 60351646 ~ 60353092 (+)

Expression


Co-expression Network