G1757564


Basic Information

Item Value
gene id G1757564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 58661140 ~ 58661504 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2012450
catcatattgcaaatggagaaaacatatgccttatgcacaagtaaaacaaaaagaaatatgtaatacaagttgaccaaggtatagtttgagcaaagtaaagtttgaattttgagcatgacaaattcgtgatggtacctgcccattaaaacatattgcaaatgtacagtgactttgaaaaagtaaggaaacataaacaaaaaaacatcccaaaatttttttttggggttaccagttgcatattttagatcaccaggtgcacatttcaggtcaccaggtgcacatttcagatcaccaggtgcacggaggaaaatgtttacttttgactttgacttttgacttcctatgacatcatattgcaaatgga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2012450 True 365 lncRNA 0.35 1 58661140 58661504

Neighbor

gene id symbol gene type direction distance location
LOC110500780 caap1 coding upstream 137510 58512708 ~ 58523630 (+)
si:ch211-212k18.7 cd68 coding upstream 196956 58456696 ~ 58464184 (+)
LOC110500903 LOC106608527 coding upstream 219869 58411942 ~ 58441271 (+)
rwdd rwdd4 coding upstream 249414 58405236 ~ 58411726 (+)
lrch4 lrch4 coding upstream 520022 58084350 ~ 58141118 (+)
elavl2 elavl2 coding downstream 189579 58851083 ~ 58904451 (+)
LOC110500773 LOC106608508 coding downstream 682104 59343608 ~ 59348145 (+)
LOC110500769 LOC106608502 coding downstream 802089 59463593 ~ 59514503 (+)
LOC118942960 NA coding downstream 831985 59493489 ~ 59498544 (+)
trnar-ucu-10 NA coding downstream 854917 59516421 ~ 59516493 (+)
G1757562 NA non-coding upstream 3389 58657289 ~ 58657751 (+)
G1757560 NA non-coding upstream 4282 58656576 ~ 58656858 (+)
G1757523 NA non-coding upstream 37668 58620636 ~ 58623472 (+)
G1757510 NA non-coding upstream 48438 58611940 ~ 58612702 (+)
G1757467 NA non-coding upstream 88068 58572862 ~ 58573072 (+)
G1757569 NA non-coding downstream 5246 58666750 ~ 58667232 (+)
G1757573 NA non-coding downstream 12122 58673626 ~ 58673898 (+)
G1757574 NA non-coding downstream 12454 58673958 ~ 58674391 (+)
G1757581 NA non-coding downstream 29193 58690697 ~ 58692180 (+)
G1757608 NA non-coding downstream 45701 58707205 ~ 58707444 (+)
G1756789 NA other upstream 732896 57926480 ~ 57928244 (+)
G1755570 NA other upstream 1866566 56793731 ~ 56794574 (+)
G1755158 NA other upstream 2273518 56386407 ~ 56387622 (+)
LOC110500754 LOC106591080 other upstream 3070000 55590450 ~ 55592100 (+)
G1757578 NA other downstream 21633 58683137 ~ 58686523 (+)
G1758801 NA other downstream 1660711 60322215 ~ 60326620 (+)
G1758818 NA other downstream 1690142 60351646 ~ 60353092 (+)
G1758786 NA other downstream 1697326 60358349 ~ 60359351 (+)
G1759168 LOC101154678 other downstream 2060654 60722158 ~ 60722472 (+)

Expression


Co-expression Network