G1760778


Basic Information

Item Value
gene id G1760778
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 63159440 ~ 63160402 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2016718
gaattgcgattctactttgtctctatactgacgcttagcttgtttgattgccttgcggagggaatagttacactgtttgtattcggtcatgtttccggtcaccttgccctgattaaaagcagtggttacttactgtaggcatggtgttctttactgttctttactgtagacgtgGTGTTCTTTACCATAGGCGAGGTGTTCTTTACTGTTCTTTACCATAGGCGAGGTGTTctttactgttctttactgtagacgtggtgttctttactgttctttactgtagacgtgGTGTTCTTTACCATAGGCGAGGTGTTCTTTACTGTTCTTCACTGTAGACGTGGTGTTCTTTACCATAggcgtggtgttctttactgttctttactgtagacgtgGTGTTCTTTACCATAggcgtggtgttctttactgttctTTACCATAGGCGTGGTGTTCTTTACCATAGacgtggtgttctttactgttctTTAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2016718 True 486 lncRNA 0.42 2 63159440 63160402

Neighbor

gene id symbol gene type direction distance location
LOC110500812 LOC106608392 coding upstream 67772 63071618 ~ 63091668 (+)
LOC110500813 tsc22d4 coding upstream 108757 62991115 ~ 63050683 (+)
mogat3a LOC105008562 coding upstream 183325 62953691 ~ 62976115 (+)
LOC118942975 NA coding upstream 238040 62919976 ~ 62921400 (+)
LOC110500953 LOC106594432 coding upstream 255904 62873681 ~ 62903536 (+)
LOC110500912 LOC105006398 coding downstream 1813 63162215 ~ 63223099 (+)
LOC118942976 NA coding downstream 75226 63232777 ~ 63238307 (+)
pfn1 prof1 coding downstream 147404 63307806 ~ 63317521 (+)
LOC110500814 LOC100194636 coding downstream 169109 63329511 ~ 63343614 (+)
si:ch73-265d7.2 NA coding downstream 203188 63363590 ~ 63372213 (+)
G1760777 NA non-coding upstream 363 63158865 ~ 63159077 (+)
G1760745 NA non-coding upstream 52399 63100357 ~ 63107041 (+)
G1760720 NA non-coding upstream 80353 63034464 ~ 63079087 (+)
G1760696 NA non-coding upstream 168707 62990373 ~ 62990733 (+)
G1760684 NA non-coding upstream 199946 62958138 ~ 62959494 (+)
G1760779 NA non-coding downstream 3600 63164002 ~ 63164216 (+)
G1760797 NA non-coding downstream 46470 63206872 ~ 63210438 (+)
G1760807 NA non-coding downstream 68573 63228975 ~ 63230031 (+)
G1760816 NA non-coding downstream 85600 63246002 ~ 63247947 (+)
G1760587 NA other upstream 345199 62811775 ~ 62814241 (+)
G1760504 NA other upstream 417621 62689513 ~ 62741819 (+)
G1759267 NA other upstream 2348820 60810202 ~ 60810620 (+)
G1760800 NA other downstream 49731 63210133 ~ 63215753 (+)
G1760865 NA other downstream 236833 63396272 ~ 63418259 (+)
G1760941 NA other downstream 389503 63549905 ~ 63551492 (+)
ctc1 LOC106595900 other downstream 672195 63832555 ~ 63879982 (+)

Expression


Co-expression Network