Gene
RNA
| Item | Value |
|---|---|
| gene id | G1760684 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 62958138 ~ 62959494 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2016605 | False | 246 | lncRNA | 0.45 | 2 | 62958138 | 62959494 |
| TU2016604 | True | 443 | lncRNA | 0.44 | 2 | 62958279 | 62959494 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942975 | NA | coding | upstream | 36738 | 62919976 ~ 62921400 (+) |
| LOC110500953 | LOC106594432 | coding | upstream | 54602 | 62873681 ~ 62903536 (+) |
| LOC110500820 | LOC100706866 | coding | upstream | 160756 | 62772369 ~ 62797382 (+) |
| txk | LOC105031518 | coding | upstream | 349715 | 62551264 ~ 62608423 (+) |
| LOC110530874 | LOC106578150 | coding | upstream | 492709 | 62456592 ~ 62465429 (+) |
| LOC110500813 | tsc22d4 | coding | downstream | 31621 | 62991115 ~ 63050683 (+) |
| LOC110500812 | LOC106608392 | coding | downstream | 112124 | 63071618 ~ 63091668 (+) |
| LOC110500912 | LOC105006398 | coding | downstream | 202721 | 63162215 ~ 63223099 (+) |
| LOC118942976 | NA | coding | downstream | 276134 | 63232777 ~ 63238307 (+) |
| pfn1 | prof1 | coding | downstream | 348312 | 63307806 ~ 63317521 (+) |
| G1760662 | NA | non-coding | upstream | 18650 | 62936669 ~ 62939488 (+) |
| G1760658 | NA | non-coding | upstream | 85175 | 62872748 ~ 62872963 (+) |
| G1760656 | NA | non-coding | upstream | 85625 | 62872198 ~ 62872513 (+) |
| G1760649 | NA | non-coding | upstream | 89583 | 62868344 ~ 62868555 (+) |
| G1760644 | NA | non-coding | upstream | 91995 | 62865889 ~ 62866143 (+) |
| G1760696 | NA | non-coding | downstream | 30879 | 62990373 ~ 62990733 (+) |
| G1760720 | NA | non-coding | downstream | 74970 | 63034464 ~ 63079087 (+) |
| G1760745 | NA | non-coding | downstream | 140863 | 63100357 ~ 63107041 (+) |
| G1760777 | NA | non-coding | downstream | 199371 | 63158865 ~ 63159077 (+) |
| G1760778 | NA | non-coding | downstream | 199946 | 63159440 ~ 63160402 (+) |
| G1760587 | NA | other | upstream | 143897 | 62811775 ~ 62814241 (+) |
| G1760504 | NA | other | upstream | 216319 | 62689513 ~ 62741819 (+) |
| G1759267 | NA | other | upstream | 2147518 | 60810202 ~ 60810620 (+) |
| G1759168 | LOC101154678 | other | upstream | 2235666 | 60722158 ~ 60722472 (+) |
| G1760800 | NA | other | downstream | 250639 | 63210133 ~ 63215753 (+) |
| si:ch73-265d7.2 | NA | other | downstream | 408212 | 63363590 ~ 63372213 (+) |
| G1760865 | NA | other | downstream | 437741 | 63396272 ~ 63418259 (+) |
| G1760941 | NA | other | downstream | 590411 | 63549905 ~ 63551492 (+) |
