LOC110501548 (LOC106586143)


Basic Information

Item Value
gene id LOC110501548
gene name LOC106586143
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 19186076 ~ 19197714 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958925.1
taggcaaaaattgaaaaaaagggatGGATCCTTAAGAGGAGattgttttttccctcaatcCAAAACTCGGAAGTGGGGAGTTACATTCTTTTTTCAGGAGCTCTGCCAAGTGGCTACGATATGGCAGCAACTATAAAGATGAGCCTATATCATCACACAAAATGCTGATGGTTTTTGCAATGTGTCGGGACTGAGTCCTGCGCGTGCAACTGCAAAATCCATTACAACAGACAGAGAAGGTTGTATAGCCTTCAATACATATTTTGGGAATGTTCgttaaaatgtttatttcagctgttcagaAATATGAATCAGAGATCATGGTTCAGAAGAGGGTGAGTAGAGAGAAACATAAAGGGAGAGGTAGTGTTAGCAGCAGCTACGTAGTGTGCGTAAAATAACACATGCGCAGAACAAGATCCGGATCCTTAGCATTGAGAAATATGTTTCTGGAGGGGCGAGGGCGAAAACTCCGTATTCACAGCCACGACCTTTTTTGAAATAAGACACAGACAGGTCAAGTCTGTCATCAACCTCCTGTTTGCTGCCTACACCGGAGACGTCTCAGCACTAAGGAGGTCAAATTTCCTCTGTTCTCCATGGACATGGAGCAGAGGGACTATGACTCCAGGACGGCTTTACATGTGGCAGCAGCAGAAGGACATGCAGAGGTGGTGAGCTTCCTCTTGGAGGCGTGCAAAGTGAACCCCGTTCCCATTGATAGGTGGGATAAGACCCCAATGGAAGAGGTCTTGCATTTTGGCCATCACGACATGGTCACCATCCTCCAGGTCTATCAAAACAAGTACAACCCACAAGAGGCCCCCAAGAAGGACAAGGAGACAGCAGAGAACAACCTGGGCGGTCTGCTGTAGTGTAGACATCCAAGCCAGTTGACGCTGCTTTTGTATCCTCTCTAATAGACTGCTGTTTCTTTGGTGGGATAAACACTTTTTGGAGTGACTTTTGTCAACTATGTATGATGACTTTATTTCTGAACTGTGTGTTTGATTAAATGTGTTTTACATTTGTTATACTCCTTTGTTTTACTGTAAGTGTTTTTCTTTACCTTTTGTTGTGCGCTTTGGTGACGGTGTTGCTTATTTTTGCTGTATCTTTCCTCTTTCGTCCTCTAACCTTTCcctcaccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgagtccCAAATCGAAGGGCAGAATCTGATTGAATCTTTGTGACATTGGTGTGCAATATAAAGTGATATTATTATACATATGCTGCTACATGTAAATTGTATATTTATGTACTGCATAAAGTAAATATATGTAATGATATCAAGTACCAATACTTAATCTAATGGAATGTAATAGTTTAGCAGTTTGGTATTTTTCCTGGATGGCCACAATGTGTAGTAATCTTTGGCCAAACCAGGCACACTAGAGTCTATGGAGCGATATGATGTTGAATCTGAAAATCAGTTTATGTTGGCACTAATATAACTCCATAACATTCTAGCTATATGTCTTGGTTAATGCCTGGTTGGAAAACATGAAAAAGACTGTAGCTCCTAAAGACATGATGGGCCACCACTTGGGTAGAAGCACTATATGGTCCTGGTAAACAAGTTTAGGATGCCAAATGTTACCAAACATCCTACGCTTCCACTAGTCCCAGTCAAACTTATCTTGACCTTTATCAACCCTACTGCATATTCCCTTTAGCTTTCATTTCATTTTATTGTACTTTGTTTGAGGCGGCACAAGACACTTTAAAACAAATGTGTGTATATTTCTGGTCTAGTGTTCTTTTTTTGTATTATGATTTTCTCATAACAATGAAATTTTACTTCTCTATTGCTCAATACTGTATGCTATGTGCACACAGTTGTCTGTTGTAGATCTGGAACCACTGACAGAATAGGGGAGTATCTGTGGCCACATGATAAAACACTAGTCTGGCATCAGTAGTCTGCAAATAGGAGGAAACCAGTTGGACCTGTACATAAACATATGGCAGTTGACATTAATATTATCAAAAACTCATCCTAGATGTCTCACACTTTTTGAATGAACTTGTGCCTTTGGCCAGGATCTAATTTTCTCACGGAGCTGGTGTGTAAAGGACCATATAAAATCATCTGAATGAGGGTTATTCATGATTCAGTGGGATTATAGCATAGTTGAATTCCATTTCATTTCCAATGAGTTTAAGAAATTAATGGAAAGCCATGTACTGATTGTATTTGCATGTTATGAATCGCTACTTGAATATGTACAAAAACA
>XM_036958926.1
aggcaaaaattgaaaaaaagggatGGATCCTTAAGAGGAGattgttttttccctcaatcCAAAACTCGGAAGTGGGGAGTTACATTCTTTTTTCAGGAGCTCTGCCAAGTGGCTACGATATGGCAGCAACTATAAAGATGAGCCTATATCATCACACAAAATGCTGATGGTTTTTGCAATGTGTCGGGACTGAGTCCTGCGCGTGCAACTGCAAAATCCATTACAACAGACAGAGAAGGTTGTATAGCCTTCAATACATATTTTGGGAATGTTCgttaaaatgtttatttcagctgttcagaAATATGAATCAGAGATCATGGTTCAGAAGAGGGTGAGTAGAGAGAAACATAAAGGGAGAGGTAGTGTTAGCAGCAGCTACGTAGTGTGCGTAAAATAACACATGCGCAGAACAAGATCCGGATCCTTAGCATTGAGAAATATGTTTCTGGAGGGGCGAGGGCGAAAACTCCGTATTCACAGCCACGACCTTTTTTGAAATAAGACACAGACAGGTCAAGTCTGTCATCAACCTCCTGTTTGCTGCCTACACCGGAGACGTCTCAGCACTAAGGAGATTTCCTCTGTTCTCCATGGACATGGAGCAGAGGGACTATGACTCCAGGACGGCTTTACATGTGGCAGCAGCAGAAGGACATGCAGAGGTGGTGAGCTTCCTCTTGGAGGCGTGCAAAGTGAACCCCGTTCCCATTGATAGGTGGGATAAGACCCCAATGGAAGAGGTCTTGCATTTTGGCCATCACGACATGGTCACCATCCTCCAGGTCTATCAAAACAAGTACAACCCACAAGAGGCCCCCAAGAAGGACAAGGAGACAGCAGAGAACAACCTGGGCGGTCTGCTGTAGTGTAGACATCCAAGCCAGTTGACGCTGCTTTTGTATCCTCTCTAATAGACTGCTGTTTCTTTGGTGGGATAAACACTTTTTGGAGTGACTTTTGTCAACTATGTATGATGACTTTATTTCTGAACTGTGTGTTTGATTAAATGTGTTTTACATTTGTTATACTCCTTTGTTTTACTGTAAGTGTTTTTCTTTACCTTTTGTTGTGCGCTTTGGTGACGGTGTTGCTTATTTTTGCTGTATCTTTCCTCTTTCGTCCTCTAACCTTTCcctcaccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgagtccCAAATCGAAGGGCAGAATCTGATTGAATCTTTGTGACATTGGTGTGCAATATAAAGTGATATTATTATACATATGCTGCTACATGTAAATTGTATATTTATGTACTGCATAAAGTAAATATATGTAATGATATCAAGTACCAATACTTAATCTAATGGAATGTAATAGTTTAGCAGTTTGGTATTTTTCCTGGATGGCCACAATGTGTAGTAATCTTTGGCCAAACCAGGCACACTAGAGTCTATGGAGCGATATGATGTTGAATCTGAAAATCAGTTTATGTTGGCACTAATATAACTCCATAACATTCTAGCTATATGTCTTGGTTAATGCCTGGTTGGAAAACATGAAAAAGACTGTAGCTCCTAAAGACATGATGGGCCACCACTTGGGTAGAAGCACTATATGGTCCTGGTAAACAAGTTTAGGATGCCAAATGTTACCAAACATCCTACGCTTCCACTAGTCCCAGTCAAACTTATCTTGACCTTTATCAACCCTACTGCATATTCCCTTTAGCTTTCATTTCATTTTATTGTACTTTGTTTGAGGCGGCACAAGACACTTTAAAACAAATGTGTGTATATTTCTGGTCTAGTGTTCTTTTTTTGTATTATGATTTTCTCATAACAATGAAATTTTACTTCTCTATTGCTCAATACTGTATGCTATGTGCACACAGTTGTCTGTTGTAGATCTGGAACCACTGACAGAATAGGGGAGTATCTGTGGCCACATGATAAAACACTAGTCTGGCATCAGTAGTCTGCAAATAGGAGGAAACCAGTTGGACCTGTACATAAACATATGGCAGTTGACATTAATATTATCAAAAACTCATCCTAGATGTCTCACACTTTTTGAATGAACTTGTGCCTTTGGCCAGGATCTAATTTTCTCACGGAGCTGGTGTGTAAAGGACCATATAAAATCATCTGAATGAGGGTTATTCATGATTCAGTGGGATTATAGCATAGTTGAATTCCATTTCATTTCCAATGAGTTTAAGAAATTAATGGAAAGCCATGTACTGATTGTATTTGCATGTTATGAATCGCTACTTGAATATGTACAAAAACA
>XM_021579202.2
GTGAGTGTTTCATGTGGTGCTCCCGGGCCTCTCTGCTCTACTGCTATCTCATTTCGTATATGTTATTTTCTGATCTAGCTAGTTCTGTTCTGCTCCCGAGTTGTGTGCAACTGATCTGCTAAACGCCTGtgctctactctagtctactgtGTTCAGTTCTGCTCTATGCAACTCTATGCTGAGTTTTGCCCTGCTTCATTCTGTTCTGATTGGTGTTCTACTGTGATGTGGAGCTCCTTTATATTCTATTCTGGGCAGTTGTGTCTCTGCATTGGAAAGCATTGTGCAGCATGATCAAAATGCATCAGATATGTTATACTGCAGAACTGTTCTTCCCCAAGTAAAACATTTCTCAACTGGTCAAGTCTGTCATCAACCTCCTGTTTGCTGCCTACACCGGAGACGTCTCAGCACTAAGGAGGTCAAATTTCCTCTGTTCTCCATGGACATGGAGCAGAGGGACTATGACTCCAGGACGGCTTTACATGTGGCAGCAGCAGAAGGACATGCAGAGGTGGTGAGCTTCCTCTTGGAGGCGTGCAAAGTGAACCCCGTTCCCATTGATAGGTGGGATAAGACCCCAATGGAAGAGGTCTTGCATTTTGGCCATCACGACATGGTCACCATCCTCCAGGTCTATCAAAACAAGTACAACCCACAAGAGGCCCCCAAGAAGGACAAGGAGACAGCAGAGAACAACCTGGGCGGTCTGCTGTAGTGTAGACATCCAAGCCAGTTGACGCTGCTTTTGTATCCTCTCTAATAGACTGCTGTTTCTTTGGTGGGATAAACACTTTTTGGAGTGACTTTTGTCAACTATGTATGATGACTTTATTTCTGAACTGTGTGTTTGATTAAATGTGTTTTACATTTGTTATACTCCTTTGTTTTACTGTAAGTGTTTTTCTTTACCTTTTGTTGTGCGCTTTGGTGACGGTGTTGCTTATTTTTGCTGTATCTTTCCTCTTTCGTCCTCTAACCTTTCcctcaccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgagtccCAAATCGAAGGGCAGAATCTGATTGAATCTTTGTGACATTGGTGTGCAATATAAAGTGATATTATTATACATATGCTGCTACATGTAAATTGTATATTTATGTACTGCATAAAGTAAATATATGTAATGATATCAAGTACCAATACTTAATCTAATGGAATGTAATAGTTTAGCAGTTTGGTATTTTTCCTGGATGGCCACAATGTGTAGTAATCTTTGGCCAAACCAGGCACACTAGAGTCTATGGAGCGATATGATGTTGAATCTGAAAATCAGTTTATGTTGGCACTAATATAACTCCATAACATTCTAGCTATATGTCTTGGTTAATGCCTGGTTGGAAAACATGAAAAAGACTGTAGCTCCTAAAGACATGATGGGCCACCACTTGGGTAGAAGCACTATATGGTCCTGGTAAACAAGTTTAGGATGCCAAATGTTACCAAACATCCTACGCTTCCACTAGTCCCAGTCAAACTTATCTTGACCTTTATCAACCCTACTGCATATTCCCTTTAGCTTTCATTTCATTTTATTGTACTTTGTTTGAGGCGGCACAAGACACTTTAAAACAAATGTGTGTATATTTCTGGTCTAGTGTTCTTTTTTTGTATTATGATTTTCTCATAACAATGAAATTTTACTTCTCTATTGCTCAATACTGTATGCTATGTGCACACAGTTGTCTGTTGTAGATCTGGAACCACTGACAGAATAGGGGAGTATCTGTGGCCACATGATAAAACACTAGTCTGGCATCAGTAGTCTGCAAATAGGAGGAAACCAGTTGGACCTGTACATAAACATATGGCAGTTGACATTAATATTATCAAAAACTCATCCTAGATGTCTCACACTTTTTGAATGAACTTGTGCCTTTGGCCAGGATCTAATTTTCTCACGGAGCTGGTGTGTAAAGGACCATATAAAATCATCTGAATGAGGGTTATTCATGATTCAGTGGGATTATAGCATAGTTGAATTCCATTTCATTTCCAATGAGTTTAAGAAATTAATGGAAAGCCATGTACTGATTGTATTTGCATGTTATGAATCGCTACTTGAATATGTACAAAAACA
>TU2043879
AACAAGATCCGGATCCTTAGCATTGAGAAATATGTTTCTGGAGGGGCGAGGGCGAAAACTCCGTATTCACAGCCACGACCTTTTTTGAAATAAGACACAGACAGGTCAAGTCTGTCATCAACCTCCTGTTTGCTGCCTACACCGGAGACGTCTCAGCACTAAGGAGGTCAAATTTCCTCTGTTCTCCATGGACATGGAGCAGAGGGACTATGACTCCAGGACGGCTTTACATGTGGCAGCAGCAGAAGGACATGCAGAGGTGGTGAGCTTCCTCTTGGAGGCGTGCAAAGTGAACCCCGTTCCCATTGATAGGTGGGATAAGACCCCAATGGAAGAGGTCTTGCATTTTGGCCATCACGACATGGTCACCATCCTCCAGGTCTATCAAAACAAGTACAACCCACAAGAGGCCCCCAAGAAGGACAAGGAGACAGCAGAGAACAACCTGGGCGGTCTGCTGTAGTGTAGACATCCAAGCCAGTTGACGCTGCTTTTGTATCCTCTCTAATAGACTGCTGTTTCTTTGGTGGGATAAACACTTTTTGGAGTGACTTTTGTCAACTATGTATGATGACTTTATTTCTGAACTGTGTGTTTGATTAAATGTGTTTTACATTTGTTATACTCCTTTGTTTTACTGTAAGTGTTTTTCTTTACCTTTTGTTGTGCGCTTTGGTGACGGTGTTGCTTATTTTTGCTGTATCTTTCCTCTTTCGTCCTCTAACCTTTCcctcaccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgagtccCAAATCGAAGGGCAGAATCTGATTGAATCTTTGTGACATTGGTGTGCAATATAAAGTGATATTATTATACATATGCTGCTACATGTAAATTGTATATTTATGTACTGCATAAAGTAAATATATGTAATGATATCAAGTACCAATACTTAATCTAATGGAATGTAATAGTTTAGCAGTTTGGTATTTTTCCTGGATGGCCACAATGTGTAGTAATCTTTGGCCAAACCAGGCACACTAGAGTCTATGGAGCGATATGATGTTGAATCTGAAAATCAGTTTATGTTGGCACTAATATAACTCCATAACATTCTAGCTATATGTCTTGGTTAATGCCTGGTTGGAAAACATGAAAAAGACTGTAGCTCCTAAAGACATGATGGGCCACCACTTGGGTAGAAGCACTATATGGTCCTGGTAAACAAGTTTAGGATGCCAAATGTTACCAAACATCCTACGCTTCCACTAGTCCCAGTCAAACTTATCTTGACCTTTATCAACCCTACTGCATATTCCCTTTAGCTTTCATTTCATTTTATTGTACTTTGTTTGAGGCGGCACAAGACACTTTAAAACAAATGTGTGTATATTTCTGGTCTAGTGTTCTTTTTTTGTATTATGATTTTCTCATAACAATGAAATTTTACTTCTCTATTGCTCAATACTGTATGCTATGTGCACACAGTTGTCTGTTGTAGATCTGGAACCACTGACAGAATAGGGGAGTATCTGTGGCCACATGATAAAACACTAGTCTGGCATCAGTAGTCTGCAAATAGGAGGAAACCAGTTGGACCTGTACATAAACATATGGCAGTTGACATTAATATTATCAAAAACTCATCCTAGATGTCTCACACTTTTTGAATGAACTTGTGCCTTTGGCCAGGATCTAATTTTCTCACGGAGCTGGTGTGTAAAGGACCATATAAAATCATCTGAATGAGGGTTATTCATGATTCAGTGGGATTATAGCATAGTTGAATTCCATTTCATTTCCAATGAGTTTAAGAAATTAATGGAAAGCCATGTACTGATTGTATTTGCATGTTATGAATCGCTACTTGAATATGTACAAAAACAGTTTGTTGATTTAGTGTGTCAGTTTTGTGGAGGTCCAATATGAATGTAAAATCCAGACAGTTGAGGAATGACACGCAGTATGACATGAGCGATACCAAAAACATAGCTACCGCAGTCCGTTTACAACCagttttTCTCAAGATTAGAATACTTGTGTTGTAGCTATACAGCAACACGTTAGCTAACGTGCTAGCTTGTAGCTAGCCATGGCTACAGTTTGCATTCATGCCATACTTGTGACATGCAGTTAATTCAGGTTTAGCTCATGTCAGCTACAATGTACCTGGAATCATTTGTAATAACTGGCTCTCTGAAGTTTATTTTGCTGCCACCAAGGTGAACCACGCGTATTTCTGCGTGCGCCACCATCTTTTCGAATTTCAACTATGAACCTTCGCCTCTGACCCAACAACACATGGCATGCGTCTGTCCTTGTTCATTCAAAACTGGTTCGAAGTCGCCCT

Function

NR:

description
glutaminase kidney isoform, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958925.1 False 2276 mRNA 0.40 5 19186076 19193519
XM_036958926.1 False 2270 mRNA 0.40 5 19186077 19193519
XM_021579202.2 False 2119 mRNA 0.40 5 19189492 19193519
TU2043879 True 2328 TUCP 0.41 6 19186488 19197714

Neighbor

gene id symbol gene type direction distance location
stat1b LOC106586142 coding upstream 12735 19133734 ~ 19173341 (+)
stat4 stat4 coding upstream 70860 19081688 ~ 19115216 (+)
LOC110502062 NA coding upstream 197658 18987023 ~ 18988418 (+)
LOC110502061 LOC106586148 coding upstream 234408 18939954 ~ 18951668 (+)
LOC110501537 LOC106581838 coding upstream 576548 18596378 ~ 18609528 (+)
LOC110501549 LOC106581842 coding downstream 6620 19200139 ~ 19213143 (+)
LOC110501551 wdr75 coding downstream 36509 19230028 ~ 19256910 (+)
LOC110501555 asnsd1 coding downstream 108860 19302379 ~ 19308366 (+)
asnsd1 asnsd1 coding downstream 114403 19307922 ~ 19311501 (+)
ankar ankar coding downstream 120295 19313814 ~ 19324650 (+)
G1785365 NA non-coding upstream 2582 19140783 ~ 19183494 (+)
G1785363 NA non-coding upstream 4130 19138589 ~ 19181946 (+)
G1785358 NA non-coding upstream 52752 19132974 ~ 19133324 (+)
G1785299 NA non-coding upstream 59096 19112567 ~ 19126980 (+)
G1785329 NA non-coding upstream 115685 19070167 ~ 19070391 (+)
G1785379 NA non-coding downstream 64512 19258031 ~ 19259223 (+)
G1785375 slc40a1 non-coding downstream 67122 19260641 ~ 19265142 (+)
G1785412 NA non-coding downstream 86206 19279725 ~ 19279935 (+)
G1785413 NA non-coding downstream 86957 19280476 ~ 19282878 (+)
G1784476 asic4 other upstream 418936 18766319 ~ 18767140 (+)
kalrna LOC106581831 other upstream 963350 18101519 ~ 18386130 (+)
G1783691 LOC106586162 other upstream 1274850 17909900 ~ 17911226 (+)
G1783622 NA other upstream 1443641 17741757 ~ 17742435 (+)
G1783087 NA other upstream 1889717 17295953 ~ 17296359 (+)
ybey ybey other downstream 377061 19570580 ~ 19572946 (+)
LOC110501568 cnot9 other downstream 423476 19603742 ~ 19627954 (+)
G1785947 znf142 other downstream 467590 19661109 ~ 19661926 (+)
asb1 asb1 other downstream 1087494 20269646 ~ 20281952 (+)
G1786330 NA other downstream 1089662 20283181 ~ 20284571 (+)

Expression


Co-expression Network