G1783691 (LOC106586162)



Basic Information


Item Value
gene id G1783691
gene name LOC106586162
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 17909900 ~ 17911226 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2042125
ACTGAAGCACAGAAACATTAACACATTATATAGAGGGTTACAGTCTACTACAGGCCTACAAGGGCTGCAAAATTCCGTGAACTTTCACAAAACTCCCAGGTCTTCCAGAAATCCCCGGTTGGAGGATTCCCTGGAATCAGTACAGAATAAGTAGGACATTCGGGAATCTTCCAACCGGGGATTTCTGAAAAAGCAGAGAGCAGATAATGATCGTATACACATTTGAGCCGGCTCCAAGTGTCTAGGTTAGGTTAGCTGGACTGTCAATGCATGTTTTTAACATATGATTAAGGTTAAATAAAGCCTTAGGATCGAATCTTTGACAGTTCAAACATTTCAATAGTTCAGAGGCAACGTACTTGTTAGGGGTTTAGAAACCCATGTTAATGATTGAATGAGACTGGATTAGAGCACAGGAGAGGACTTGCATGCAGAACacccagtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtatacagtatgtgtacacgcatgtgtgtgtataagtaATGTTGGGTGATTGTAGAACTGATGGTGATTGGCCCCCGGTCCTGTTTACCGGTGATGATGTCCTCGATGGCTCCGTCCTTTCCCTCGTAGACGTGGCGGCTGCCCGTATCCTTCACCTGCTTCTtcctcagctcagctatcacctcCTGCTGCTGACTCCTGCCCCGGGTGTTCTTATGGGACGGAGACTGGTggggagaCTTCTTGTCCTCCTGGTCCATCATGGCCTCCTGCTCCAGACGTTTCTCCATCATCATCTGCTCCGCTCTCTTCTTCTGCTCGTTGTCCTCCTCCG

Function


NR:

description
PREDICTED: formin-like protein 2 isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2042125 True 820 TUCP 0.48 2 17909900 17911226

Neighbor


gene id symbol gene type direction distance location
LOC110501528 LOC106581829 coding upstream 5897 17869458 ~ 17904003 (+)
LOC110501527 LOC106581827 coding upstream 88270 17818646 ~ 17821630 (+)
LOC110501524 LOC106586168 coding upstream 414092 17489320 ~ 17495933 (+)
LOC110501522 ermn coding upstream 565526 17342386 ~ 17344374 (+)
LOC110501521 cytip coding upstream 568975 17336457 ~ 17340925 (+)
kalrna LOC106581831 coding downstream 190293 18101519 ~ 18386130 (+)
LOC110501533 LOC106581832 coding downstream 480611 18391837 ~ 18395440 (+)
LOC110501534 cryba2 coding downstream 490655 18401881 ~ 18404554 (+)
LOC110501535 LOC106581833 coding downstream 495483 18406709 ~ 18410510 (+)
LOC110501537 LOC106581838 coding downstream 685152 18596378 ~ 18609528 (+)
G1783706 NA non-coding upstream 24921 17849893 ~ 17884979 (+)
G1783705 NA non-coding upstream 60089 17849607 ~ 17849811 (+)
G1783704 NA non-coding upstream 60351 17849317 ~ 17849549 (+)
G1783701 NA non-coding upstream 66111 17843480 ~ 17843789 (+)
G1783696 NA non-coding upstream 73691 17835360 ~ 17836209 (+)
G1784020 LOC106581830 non-coding downstream 130282 18041508 ~ 18041753 (+)
G1784021 NA non-coding downstream 130711 18041937 ~ 18042136 (+)
G1784031 NA non-coding downstream 141063 18052289 ~ 18052600 (+)
G1784033 NA non-coding downstream 145444 18056670 ~ 18056875 (+)
G1784034 NA non-coding downstream 146690 18057916 ~ 18058127 (+)
G1783622 NA other upstream 167465 17741757 ~ 17742435 (+)
G1783087 NA other upstream 613541 17295953 ~ 17296359 (+)
G1782390 NA other upstream 868227 17006034 ~ 17041673 (+)
G1781813 NA other upstream 1636790 16272389 ~ 16273110 (+)
G1781423 LOC106581799 other upstream 1846499 16062757 ~ 16063401 (+)
G1784476 asic4 other downstream 855093 18766319 ~ 18767140 (+)
LOC110501548 LOC106586143 other downstream 1275262 19186076 ~ 19197714 (+)
ybey ybey other downstream 1659354 19570580 ~ 19572946 (+)
LOC110501568 cnot9 other downstream 1705769 19603742 ~ 19627954 (+)

Expression



Co-expression Network