G1783188


Basic Information

Item Value
gene id G1783188
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 17379595 ~ 17379804 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2041593
cagactgggtcgaaggttcactttccaacaagacaacgaccctaagcacacagccaagacaacgcatgagtggtttcaagacaagtctctgaatatccttgagtggcccagccaggtcccgtacttgaacccaatctgaacctaagacctgaaaatagctttgcagccaacctgatagagcttgagaggatctgaagagaatAATCTCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2041593 True 210 lncRNA 0.48 1 17379595 17379804

Neighbor

gene id symbol gene type direction distance location
LOC110501522 ermn coding upstream 35221 17342386 ~ 17344374 (+)
LOC110501521 cytip coding upstream 38670 17336457 ~ 17340925 (+)
LOC110501520 acvr1c coding upstream 48311 17302600 ~ 17331284 (+)
LOC110501518 acvr1 coding upstream 88663 17255880 ~ 17290932 (+)
LOC110501515 ccdc148 coding upstream 153539 17178459 ~ 17226056 (+)
LOC110501524 LOC106586168 coding downstream 109516 17489320 ~ 17495933 (+)
LOC110501527 LOC106581827 coding downstream 438842 17818646 ~ 17821630 (+)
LOC110501528 LOC106581829 coding downstream 489654 17869458 ~ 17904003 (+)
kalrna LOC106581831 coding downstream 721715 18101519 ~ 18386130 (+)
LOC110501533 LOC106581832 coding downstream 1012033 18391837 ~ 18395440 (+)
G1783186 NA non-coding upstream 575 17378755 ~ 17379020 (+)
G1783120 NA non-coding upstream 21339 17358020 ~ 17358256 (+)
G1783090 NA non-coding upstream 54881 17318586 ~ 17324714 (+)
G1782530 NA non-coding upstream 136850 17241200 ~ 17242745 (+)
G1782532 NA non-coding upstream 143988 17232881 ~ 17235607 (+)
G1783200 NA non-coding downstream 7667 17387471 ~ 17387720 (+)
G1783206 NA non-coding downstream 11383 17391187 ~ 17391415 (+)
G1783220 NA non-coding downstream 23651 17403455 ~ 17403759 (+)
G1783222 NA non-coding downstream 26645 17406449 ~ 17406675 (+)
G1783230 NA non-coding downstream 32214 17412018 ~ 17412259 (+)
G1783087 NA other upstream 83236 17295953 ~ 17296359 (+)
G1782390 NA other upstream 337922 17006034 ~ 17041673 (+)
G1781813 NA other upstream 1106485 16272389 ~ 16273110 (+)
G1781423 LOC106581799 other upstream 1316194 16062757 ~ 16063401 (+)
G1781293 LOC106586198 other upstream 1531000 15839604 ~ 15848595 (+)
G1783622 NA other downstream 361953 17741757 ~ 17742435 (+)
G1783691 LOC106586162 other downstream 530096 17909900 ~ 17911226 (+)
G1784476 asic4 other downstream 1386515 18766319 ~ 18767140 (+)
LOC110501548 LOC106586143 other downstream 1806684 19186076 ~ 19197714 (+)

Expression


Co-expression Network