Gene
RNA
| Item | Value |
|---|---|
| gene id | G1786343 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 20317479 ~ 20318069 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109108415 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2044960 | True | 591 | lncRNA | 0.53 | 1 | 20317479 | 20318069 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| asb1 | asb1 | coding | upstream | 35627 | 20269646 ~ 20281952 (+) |
| traf3ip1 | traf3ip1 | coding | upstream | 58206 | 20206402 ~ 20259273 (+) |
| adarb1b | LOC106581860 | coding | upstream | 141819 | 19997839 ~ 20175660 (+) |
| LOC110502116 | NA | coding | upstream | 444782 | 19872147 ~ 19872697 (+) |
| zgc:66484 | LOC106581857 | coding | upstream | 573530 | 19734287 ~ 19743949 (+) |
| LOC110502064 | LOC106581735 | coding | downstream | 20059 | 20338128 ~ 20343956 (+) |
| twist2 | twist2 | coding | downstream | 41571 | 20359640 ~ 20365532 (+) |
| LOC110502066 | NA | coding | downstream | 625855 | 20943924 ~ 20945171 (+) |
| LOC110501589 | LOC106581698 | coding | downstream | 1310475 | 21628544 ~ 21667403 (+) |
| LOC110501590 | LOC106581697 | coding | downstream | 1351447 | 21669516 ~ 21701293 (+) |
| G1786331 | NA | non-coding | upstream | 29086 | 20287725 ~ 20288393 (+) |
| G1786329 | NA | non-coding | upstream | 35059 | 20282198 ~ 20282420 (+) |
| G1786321 | NA | non-coding | upstream | 52366 | 20264499 ~ 20265113 (+) |
| G1786282 | NA | non-coding | upstream | 129678 | 20187583 ~ 20187801 (+) |
| G1786354 | NA | non-coding | downstream | 26731 | 20344800 ~ 20345227 (+) |
| G1786870 | NA | non-coding | downstream | 71382 | 20389451 ~ 20456014 (+) |
| G1786866 | NA | non-coding | downstream | 81131 | 20399200 ~ 20401362 (+) |
| G1787075 | NA | non-coding | downstream | 359262 | 20677331 ~ 20677534 (+) |
| G1787081 | NA | non-coding | downstream | 365244 | 20683313 ~ 20683528 (+) |
| G1786330 | NA | other | upstream | 32908 | 20283181 ~ 20284571 (+) |
| G1785947 | znf142 | other | upstream | 655553 | 19661109 ~ 19661926 (+) |
| LOC110501568 | cnot9 | other | upstream | 689719 | 19603742 ~ 19627954 (+) |
| ybey | ybey | other | upstream | 745040 | 19570580 ~ 19572946 (+) |
| G1787719 | NA | other | downstream | 816196 | 21134265 ~ 21136477 (+) |
| G1788811 | LOC106581691 | other | downstream | 1677295 | 21995364 ~ 21996093 (+) |
| G1788815 | LOC100136012 | other | downstream | 1680404 | 21998473 ~ 21999623 (+) |
| G1790442 | LOC106582152 | other | downstream | 3098024 | 23416093 ~ 23432383 (+) |
| G1790805 | NA | other | downstream | 3800493 | 24118562 ~ 24119475 (+) |
