Gene
RNA
| Item | Value |
|---|---|
| gene id | G1787081 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 20683313 ~ 20683528 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2045737 | True | 216 | lncRNA | 0.38 | 1 | 20683313 | 20683528 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| twist2 | twist2 | coding | upstream | 317781 | 20359640 ~ 20365532 (+) |
| LOC110502064 | LOC106581735 | coding | upstream | 339357 | 20338128 ~ 20343956 (+) |
| asb1 | asb1 | coding | upstream | 401461 | 20269646 ~ 20281952 (+) |
| traf3ip1 | traf3ip1 | coding | upstream | 424040 | 20206402 ~ 20259273 (+) |
| adarb1b | LOC106581860 | coding | upstream | 507653 | 19997839 ~ 20175660 (+) |
| LOC110502066 | NA | coding | downstream | 260396 | 20943924 ~ 20945171 (+) |
| LOC110501589 | LOC106581698 | coding | downstream | 945016 | 21628544 ~ 21667403 (+) |
| LOC110501590 | LOC106581697 | coding | downstream | 985988 | 21669516 ~ 21701293 (+) |
| c22h2orf69 | cssa21h2orf69 | coding | downstream | 1245834 | 21929362 ~ 21934705 (+) |
| esyt3 | LOC106581688 | coding | downstream | 1351844 | 22035372 ~ 22076238 (+) |
| G1787075 | NA | non-coding | upstream | 5779 | 20677331 ~ 20677534 (+) |
| G1786870 | NA | non-coding | upstream | 227299 | 20389451 ~ 20456014 (+) |
| G1786866 | NA | non-coding | upstream | 281951 | 20399200 ~ 20401362 (+) |
| G1786354 | NA | non-coding | upstream | 338086 | 20344800 ~ 20345227 (+) |
| G1786343 | NA | non-coding | upstream | 365244 | 20317479 ~ 20318069 (+) |
| G1787114 | NA | non-coding | downstream | 62986 | 20746514 ~ 20746913 (+) |
| G1787121 | NA | non-coding | downstream | 72044 | 20755572 ~ 20757681 (+) |
| G1787128 | LOC106581870 | non-coding | downstream | 82384 | 20765912 ~ 20773791 (+) |
| G1787486 | NA | non-coding | downstream | 284918 | 20968446 ~ 20988849 (+) |
| G1787608 | NA | non-coding | downstream | 315238 | 20998766 ~ 20999045 (+) |
| G1786330 | NA | other | upstream | 398742 | 20283181 ~ 20284571 (+) |
| G1785947 | znf142 | other | upstream | 1021387 | 19661109 ~ 19661926 (+) |
| LOC110501568 | cnot9 | other | upstream | 1055553 | 19603742 ~ 19627954 (+) |
| ybey | ybey | other | upstream | 1110874 | 19570580 ~ 19572946 (+) |
| G1787719 | NA | other | downstream | 450737 | 21134265 ~ 21136477 (+) |
| G1788811 | LOC106581691 | other | downstream | 1311836 | 21995364 ~ 21996093 (+) |
| G1788815 | LOC100136012 | other | downstream | 1314945 | 21998473 ~ 21999623 (+) |
| G1790442 | LOC106582152 | other | downstream | 2732565 | 23416093 ~ 23432383 (+) |
| G1790805 | NA | other | downstream | 3435034 | 24118562 ~ 24119475 (+) |
