Gene
RNA
| Item | Value |
|---|---|
| gene id | G1788442 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 21741537 ~ 21746817 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2047180 | False | 241 | lncRNA | 0.45 | 2 | 21741537 | 21746817 |
| TU2047181 | True | 241 | lncRNA | 0.45 | 2 | 21741537 | 21746817 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501590 | LOC106581697 | coding | upstream | 40244 | 21669516 ~ 21701293 (+) |
| LOC110501589 | LOC106581698 | coding | upstream | 74134 | 21628544 ~ 21667403 (+) |
| LOC110502066 | NA | coding | upstream | 796366 | 20943924 ~ 20945171 (+) |
| twist2 | twist2 | coding | upstream | 1376005 | 20359640 ~ 20365532 (+) |
| LOC110502064 | LOC106581735 | coding | upstream | 1397581 | 20338128 ~ 20343956 (+) |
| c22h2orf69 | cssa21h2orf69 | coding | downstream | 182545 | 21929362 ~ 21934705 (+) |
| esyt3 | LOC106581688 | coding | downstream | 288555 | 22035372 ~ 22076238 (+) |
| LOC118943635 | NA | coding | downstream | 329560 | 22076377 ~ 22079829 (+) |
| LOC110501601 | LOC106581998 | coding | downstream | 486447 | 22233264 ~ 22235783 (+) |
| LOC110501603 | NA | coding | downstream | 1297799 | 23044616 ~ 23050204 (+) |
| G1788441 | NA | non-coding | upstream | 40 | 21741002 ~ 21741497 (+) |
| G1788294 | LOC106581699 | non-coding | upstream | 150554 | 21572582 ~ 21590983 (+) |
| G1788331 | NA | non-coding | upstream | 172630 | 21565065 ~ 21568907 (+) |
| G1787919 | NA | non-coding | upstream | 251328 | 21489955 ~ 21490209 (+) |
| G1787918 | NA | non-coding | upstream | 251918 | 21489352 ~ 21489619 (+) |
| G1788457 | NA | non-coding | downstream | 14399 | 21761216 ~ 21761864 (+) |
| G1788460 | NA | non-coding | downstream | 19090 | 21765907 ~ 21766137 (+) |
| G1788648 | NA | non-coding | downstream | 24212 | 21771029 ~ 21771228 (+) |
| G1788659 | NA | non-coding | downstream | 31075 | 21777892 ~ 21778223 (+) |
| G1788667 | NA | non-coding | downstream | 36396 | 21783213 ~ 21783719 (+) |
| G1787719 | NA | other | upstream | 605060 | 21134265 ~ 21136477 (+) |
| G1786330 | NA | other | upstream | 1456966 | 20283181 ~ 20284571 (+) |
| asb1 | asb1 | other | upstream | 1459683 | 20269646 ~ 20281952 (+) |
| G1785947 | znf142 | other | upstream | 2079611 | 19661109 ~ 19661926 (+) |
| LOC110501568 | cnot9 | other | upstream | 2113777 | 19603742 ~ 19627954 (+) |
| G1788811 | LOC106581691 | other | downstream | 248547 | 21995364 ~ 21996093 (+) |
| G1788815 | LOC100136012 | other | downstream | 251656 | 21998473 ~ 21999623 (+) |
| G1790442 | LOC106582152 | other | downstream | 1669276 | 23416093 ~ 23432383 (+) |
| G1790805 | NA | other | downstream | 2371745 | 24118562 ~ 24119475 (+) |
| LOC110501605 | LOC106582130 | other | downstream | 2647251 | 24394068 ~ 24423067 (+) |
