G1796862


Basic Information

Item Value
gene id G1796862
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 29043150 ~ 29043457 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2056373
CTCTTGCAACATACATGGTAGGAGATAAGCCTTTCACTGTGTTTACTGCGGTGttctaaacattttttttataataattatttattacaaaaaacacaaggaaggggtaacattaaagtattagaacatgaaggacaaacaatgcagcatcaagacactatcaaacatgtatcagtctttccgcaacagagccatccttatgtgtgagggtgcgtgtgcatgatagtgatataaaatatatgtcatagtttcctttttcatgatcacaatcttgtgaaaccccgaaccctccaagatcccaccacagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2056373 True 308 lncRNA 0.37 1 29043150 29043457

Neighbor

gene id symbol gene type direction distance location
LOC110501700 LOC106582186 coding upstream 32869 28997763 ~ 29010281 (+)
LOC110502121 cld14 coding upstream 48601 28993333 ~ 28994549 (+)
LOC110502085 LOC106582160 coding upstream 61949 28977890 ~ 28984226 (+)
epha6 LOC106582188 coding upstream 66411 28755790 ~ 28976739 (+)
LOC110501697 LOC106582162 coding upstream 340486 28701867 ~ 28702664 (+)
LOC110501701 LOC106586531 coding downstream 20182 29063639 ~ 29094498 (+)
LOC110501702 LOC106582183 coding downstream 58656 29102113 ~ 29167753 (+)
LOC110501703 LOC106582182 coding downstream 135414 29178871 ~ 29212842 (+)
LOC118943584 LOC106582182 coding downstream 184214 29227671 ~ 29243652 (+)
tpt1 tpt1 coding downstream 211900 29255357 ~ 29258127 (+)
G1796841 NA non-coding upstream 15682 29027075 ~ 29027468 (+)
G1796839 NA non-coding upstream 17477 29024618 ~ 29025673 (+)
G1796835 NA non-coding upstream 22554 29020043 ~ 29020596 (+)
G1796685 NA non-coding upstream 43357 28999581 ~ 28999793 (+)
G1796683 NA non-coding upstream 56277 28986572 ~ 28986873 (+)
G1796954 NA non-coding downstream 204480 29247937 ~ 29248165 (+)
G1796955 NA non-coding downstream 206042 29249499 ~ 29249774 (+)
G1796971 NA non-coding downstream 232140 29275597 ~ 29275818 (+)
G1796977 NA non-coding downstream 252247 29295704 ~ 29295929 (+)
G1796994 NA non-coding downstream 272134 29315591 ~ 29315838 (+)
G1795550 NA other upstream 951034 28091565 ~ 28092116 (+)
LOC110501693 LOC106582057 other upstream 1005072 28036917 ~ 28052019 (+)
G1795411 NA other upstream 1130275 27898367 ~ 27912875 (+)
G1797582 NA other downstream 700735 29744192 ~ 29744854 (+)
LOC118943632 LOC100194703 other downstream 880100 29917773 ~ 29933035 (+)
G1798168 NA other downstream 1457199 30500656 ~ 30545954 (+)
G1798397 NA other downstream 1845204 30888661 ~ 30891067 (+)
G1798579 NA other downstream 2203024 31246481 ~ 31292205 (+)

Expression


Co-expression Network