G1797528


Basic Information

Item Value
gene id G1797528
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 29639984 ~ 29640263 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2057094
ATttagctcctctctctcatatccaaactacatacacacacacccacaggcaaacatgcatacacacatacacacacattgctGCTCACCCAGTGCTCACCCAGTCTACAGTGGGAGGTTTTAGCATTATAAAGTGTGACGCCAGCCCTTCCTGTGCTCTGGCCTGATTCATCTCTGTTCAATAACAACATGGagcagctccctctctctctctgtctgctgttaCTTGTGTCCCAACAGCAAACAGCTCAGTATCAccctgccagtgtgtgtgtgagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2057094 True 280 lncRNA 0.49 1 29639984 29640263

Neighbor

gene id symbol gene type direction distance location
LOC118943646 NA coding upstream 17910 29621005 ~ 29622074 (+)
LOC110501709 LOC106582175 coding upstream 50901 29500150 ~ 29589083 (+)
tsc22d1 LOC107713726 coding upstream 212578 29340787 ~ 29427406 (+)
LOC110501706 LOC106582180 coding upstream 347409 29290937 ~ 29292575 (+)
LOC110501705 NA coding upstream 375566 29260930 ~ 29264418 (+)
LOC110501715 LOC106582169 coding downstream 218492 29858755 ~ 29872101 (+)
LOC118943587 NA coding downstream 253863 29894126 ~ 29903673 (+)
LOC110501716 LOC106582159 coding downstream 272018 29912281 ~ 29915808 (+)
LOC118943632 LOC100194703 coding downstream 277510 29917773 ~ 29933035 (+)
LOC110501719 LOC106582226 coding downstream 364418 30004681 ~ 30082509 (+)
G1797499 NA non-coding upstream 18995 29620635 ~ 29620989 (+)
G1797481 NA non-coding upstream 37988 29601734 ~ 29601996 (+)
G1797466 NA non-coding upstream 47379 29592343 ~ 29592605 (+)
G1797465 NA non-coding upstream 47854 29591906 ~ 29592130 (+)
G1797530 NA non-coding downstream 764 29641027 ~ 29641228 (+)
G1797531 NA non-coding downstream 1052 29641315 ~ 29641538 (+)
G1797559 NA non-coding downstream 24657 29664920 ~ 29665320 (+)
G1797575 NA non-coding downstream 37869 29678132 ~ 29678419 (+)
G1797579 NA non-coding downstream 39614 29679877 ~ 29680180 (+)
LOC110501700 LOC106582186 other upstream 629711 28997763 ~ 29010281 (+)
LOC110502085 LOC106582160 other upstream 655758 28977890 ~ 28984226 (+)
G1795550 NA other upstream 1547868 28091565 ~ 28092116 (+)
LOC110501693 LOC106582057 other upstream 1601906 28036917 ~ 28052019 (+)
G1795411 NA other upstream 1727109 27898367 ~ 27912875 (+)
G1797582 NA other downstream 103929 29744192 ~ 29744854 (+)
G1798168 NA other downstream 860393 30500656 ~ 30545954 (+)
G1798397 NA other downstream 1248398 30888661 ~ 30891067 (+)
G1798579 NA other downstream 1606218 31246481 ~ 31292205 (+)

Expression


Co-expression Network