G1802993


Basic Information

Item Value
gene id G1802993
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 34381154 ~ 34381454 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2063000
cggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctctatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaatgtcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgttatcgcagcaaaaggtggcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2063000 True 301 lncRNA 0.42 1 34381154 34381454

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-176 NA coding upstream 586056 33795025 ~ 33795098 (+)
LOC118943604 NA coding upstream 1181838 33196605 ~ 33199316 (+)
LOC110501784 LOC106582286 coding upstream 1210010 32994900 ~ 33171144 (+)
trnaa-ugc-175 NA coding upstream 1383645 32997434 ~ 32997509 (+)
LOC110501783 kansl1l coding upstream 1388144 32964607 ~ 32993010 (+)
LOC110501788 vwc2l coding downstream 82279 34463733 ~ 34499490 (+)
LOC110501792 LOC106582299 coding downstream 221425 34602879 ~ 34772042 (+)
LOC110501793 LOC106582300 coding downstream 400051 34781505 ~ 34790502 (+)
LOC118943586 NA coding downstream 666278 35047732 ~ 35049458 (+)
LOC110501795 LOC106596205 coding downstream 1358973 35740427 ~ 35760519 (+)
G1802599 NA non-coding upstream 218313 34122515 ~ 34162841 (+)
G1802501 NA non-coding upstream 378462 34002397 ~ 34002692 (+)
G1802063 NA non-coding upstream 397603 33983207 ~ 33983551 (+)
G1802061 NA non-coding upstream 399883 33980941 ~ 33981271 (+)
G1801974 NA non-coding upstream 541973 33838830 ~ 33839181 (+)
G1803014 NA non-coding downstream 10533 34391987 ~ 34392210 (+)
G1803025 NA non-coding downstream 19365 34400819 ~ 34401027 (+)
G1803034 NA non-coding downstream 28527 34409981 ~ 34410209 (+)
G1803175 NA non-coding downstream 189870 34571324 ~ 34571658 (+)
G1803179 NA non-coding downstream 199093 34580547 ~ 34581162 (+)
G1800754 NA other upstream 1466972 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 2006973 32317123 ~ 32374208 (+)
G1798597 NA other upstream 3083735 31293552 ~ 31297419 (+)
G1798579 NA other upstream 3088949 31246481 ~ 31292205 (+)
G1798397 NA other upstream 3490087 30888661 ~ 30891067 (+)
G1804873 NA other downstream 1493108 35874562 ~ 35875452 (+)
G1805191 NA other downstream 1982142 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 2053546 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 3698412 38079807 ~ 38213191 (+)

Expression


Co-expression Network