G1803175


Basic Information

Item Value
gene id G1803175
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 34571324 ~ 34571658 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2063185
gtttAGAATAGgtgagtgtctggagcatcagcatttgtgggttcgattacaggctcaaaatggccagaaacaaataactttcttctgaaactcatcagtctattcttgttctgagaaattaaggctattccatgcgagaaattaccaagaaactgaagacctcgtacaacgctgtgtactgctcccttcagagaacagtgcaaactggccctaaccagaatagaaagaggagtgggaggccctggtgcacaactgagcaagaatacaagtacattagagtgtctagtttgagaaacagacgcctcacaagtcctcaactggcagcttcattaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2063185 True 335 lncRNA 0.43 1 34571324 34571658

Neighbor

gene id symbol gene type direction distance location
LOC110501788 vwc2l coding upstream 71834 34463733 ~ 34499490 (+)
trnaa-ugc-176 NA coding upstream 776226 33795025 ~ 33795098 (+)
LOC118943604 NA coding upstream 1372008 33196605 ~ 33199316 (+)
LOC110501784 LOC106582286 coding upstream 1400180 32994900 ~ 33171144 (+)
trnaa-ugc-175 NA coding upstream 1573815 32997434 ~ 32997509 (+)
LOC110501792 LOC106582299 coding downstream 31221 34602879 ~ 34772042 (+)
LOC110501793 LOC106582300 coding downstream 209847 34781505 ~ 34790502 (+)
LOC118943586 NA coding downstream 476074 35047732 ~ 35049458 (+)
LOC110501795 LOC106596205 coding downstream 1168769 35740427 ~ 35760519 (+)
LOC110501797 LOC106582303 coding downstream 1197523 35769181 ~ 35780544 (+)
G1803034 NA non-coding upstream 161115 34409981 ~ 34410209 (+)
G1803025 NA non-coding upstream 170297 34400819 ~ 34401027 (+)
G1803014 NA non-coding upstream 179114 34391987 ~ 34392210 (+)
G1802993 NA non-coding upstream 189870 34381154 ~ 34381454 (+)
G1802599 NA non-coding upstream 408483 34122515 ~ 34162841 (+)
G1803179 NA non-coding downstream 8889 34580547 ~ 34581162 (+)
G1803189 NA non-coding downstream 22923 34594581 ~ 34594819 (+)
G1803190 NA non-coding downstream 23402 34595060 ~ 34595484 (+)
G1803226 NA non-coding downstream 56415 34628073 ~ 34635952 (+)
G1803199 NA non-coding downstream 68780 34640438 ~ 34656889 (+)
G1800754 NA other upstream 1657142 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 2197143 32317123 ~ 32374208 (+)
G1798597 NA other upstream 3273905 31293552 ~ 31297419 (+)
G1798579 NA other upstream 3279119 31246481 ~ 31292205 (+)
G1798397 NA other upstream 3680257 30888661 ~ 30891067 (+)
G1804873 NA other downstream 1302904 35874562 ~ 35875452 (+)
G1805191 NA other downstream 1791938 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 1863342 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 3508208 38079807 ~ 38213191 (+)

Expression


Co-expression Network