G1803190


Basic Information

Item Value
gene id G1803190
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 34595060 ~ 34595484 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2063204
ggtctagagcacatatgtcagagtcaaggcccgcgggccacatccggcccgcaagaaggttttttacggcccctgggatgatcttgatttattattagaaccggcccgcagcaagccggcagcccgcagatcttttacacgcaccaatactacatttcccacaatgcaaaggtgacgcaccgagcagtaggctgcttcatttcaatatttattggcacagcagtcgtcagcatcacagtaaaattaactttcagatacccatcaaaaatggcaaaacggaaggtggatactgagaaccgggggtttcaaacaaggtgggagtcggagtatatgttcacgaaggtagctggaaaacctgtgtgtcttctgtgtggagaaagtgtggcggtactgaaagagtataatctgagacgacattatgaaac

Function

NR:

description
PREDICTED: general transcription factor II-I repeat domain-containing protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2063204 True 425 lncRNA 0.48 1 34595060 34595484

Neighbor

gene id symbol gene type direction distance location
LOC110501788 vwc2l coding upstream 95570 34463733 ~ 34499490 (+)
trnaa-ugc-176 NA coding upstream 799962 33795025 ~ 33795098 (+)
LOC118943604 NA coding upstream 1395744 33196605 ~ 33199316 (+)
LOC110501784 LOC106582286 coding upstream 1423916 32994900 ~ 33171144 (+)
LOC110501792 LOC106582299 coding downstream 7395 34602879 ~ 34772042 (+)
LOC110501793 LOC106582300 coding downstream 186021 34781505 ~ 34790502 (+)
LOC118943586 NA coding downstream 452248 35047732 ~ 35049458 (+)
LOC110501795 LOC106596205 coding downstream 1144943 35740427 ~ 35760519 (+)
LOC110501797 LOC106582303 coding downstream 1173697 35769181 ~ 35780544 (+)
G1803189 NA non-coding upstream 241 34594581 ~ 34594819 (+)
G1803179 NA non-coding upstream 13898 34580547 ~ 34581162 (+)
G1803175 NA non-coding upstream 23402 34571324 ~ 34571658 (+)
G1803034 NA non-coding upstream 184851 34409981 ~ 34410209 (+)
G1803025 NA non-coding upstream 194033 34400819 ~ 34401027 (+)
G1803226 NA non-coding downstream 32589 34628073 ~ 34635952 (+)
G1803199 NA non-coding downstream 44954 34640438 ~ 34656889 (+)
G1803203 NA non-coding downstream 46795 34642279 ~ 34650231 (+)
G1803525 NA non-coding downstream 229810 34825294 ~ 34825805 (+)
G1800754 NA other upstream 1680878 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 2220879 32317123 ~ 32374208 (+)
G1798597 NA other upstream 3297641 31293552 ~ 31297419 (+)
G1798579 NA other upstream 3302855 31246481 ~ 31292205 (+)
G1798397 NA other upstream 3703993 30888661 ~ 30891067 (+)
G1804873 NA other downstream 1279078 35874562 ~ 35875452 (+)
G1805191 NA other downstream 1768112 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 1839516 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 3484382 38079807 ~ 38213191 (+)

Expression


Co-expression Network