G1803525


Basic Information

Item Value
gene id G1803525
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 34825294 ~ 34825805 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2063580
cctgatgtactggcctgtctcctggtagcgccttcatgctctggacactacgctgacagacacagcaaaccttcttgccacatctcgcattgatgtgccatcctggatgagctgcactacctgagccacttgtgtgggttgtagattccgtctcatgctaccactagagtgaaagcaccgccagcattcaaaagtgaccaaaacatcagccaggaagcataggaactgagaagttgtctgtggtccccacctgcagaaccactcctttattgggggtgtcttgctaaatgcctataatttccacctgttgtctattccatttttacaacagcatgtgaaatgtattgtcaatcagtgttgcttcctaagtggacagtttgatttcacagaagtgtgattgacttggagttacattgtgtttaagtgttccctttatttctttgagcagtgtatttaataaatgtatcatgtCGTGTATGTATGAAAGGcgtacaatgatggcaaaaaacaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2063580 True 512 lncRNA 0.44 1 34825294 34825805

Neighbor

gene id symbol gene type direction distance location
LOC110501793 LOC106582300 coding upstream 34792 34781505 ~ 34790502 (+)
LOC110501792 LOC106582299 coding upstream 53252 34602879 ~ 34772042 (+)
LOC110501788 vwc2l coding upstream 325804 34463733 ~ 34499490 (+)
trnaa-ugc-176 NA coding upstream 1030196 33795025 ~ 33795098 (+)
LOC118943604 NA coding upstream 1625978 33196605 ~ 33199316 (+)
LOC118943586 NA coding downstream 221927 35047732 ~ 35049458 (+)
LOC110501795 LOC106596205 coding downstream 914622 35740427 ~ 35760519 (+)
LOC110501797 LOC106582303 coding downstream 943376 35769181 ~ 35780544 (+)
LOC110501798 NA coding downstream 957378 35783183 ~ 35814912 (+)
LOC110502095 LOC106582360 coding downstream 1117705 35943510 ~ 36060137 (+)
G1803199 NA non-coding upstream 168405 34640438 ~ 34656889 (+)
G1803203 NA non-coding upstream 175063 34642279 ~ 34650231 (+)
G1803226 NA non-coding upstream 189342 34628073 ~ 34635952 (+)
G1803190 NA non-coding upstream 229810 34595060 ~ 34595484 (+)
G1803546 NA non-coding downstream 14576 34840381 ~ 34840691 (+)
G1803549 NA non-coding downstream 16479 34842284 ~ 34842574 (+)
G1803586 NA non-coding downstream 43355 34869160 ~ 34869378 (+)
G1803689 NA non-coding downstream 109495 34935300 ~ 34935525 (+)
G1803693 NA non-coding downstream 110997 34936802 ~ 34937028 (+)
G1800754 NA other upstream 1911112 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 2451113 32317123 ~ 32374208 (+)
G1798597 NA other upstream 3527875 31293552 ~ 31297419 (+)
G1798579 NA other upstream 3533089 31246481 ~ 31292205 (+)
G1798397 NA other upstream 3934227 30888661 ~ 30891067 (+)
G1804873 NA other downstream 1048757 35874562 ~ 35875452 (+)
G1805191 NA other downstream 1537791 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 1609195 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 3254061 38079807 ~ 38213191 (+)

Expression


Co-expression Network