G1806401


Basic Information

Item Value
gene id G1806401
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 36944865 ~ 36945458 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2066678
CCCTGTATCCACTTCAAACTTCACATCTGATTCATTGACTTTCAATTATAATGGGATAGGGTCTGCTTTTGGAATGTTCTCTGATATGCTGTTCATTGTAAACATAAATCCTCTTCTTCCCCTTTGTTTTGTTCAGCTTCCCAGCTGATGTGACGTGTCCCATTGTTCAGCTTCCCCGCTGTGACGTGTCCCATTGTTCAGCTTCCCCACTGATGTGACGTGTCCCATTGTTCAGCTTCCCACTGATATGACGTGTCCCAATGTTCAAGCTTCCCCGCTGATGTGACGTGTTACCATTGTTCAGCTTCCCACTGATGTGACGTGTCCCATTGTTCAGCTTCCCACTGATGTGACGTGTTACCATTGTTCAGCTTCCCACTGATGTGACGTGTTTCCATTGTTCAGCTTCCCACTGATGTGACGTGTTACCATTGTTCAGCTTCCCACTGATGTGACGTGTTACCATTGTTCAGCTTCCCACTGATGTGACGTGTTACCATTGTTCAGCTTCCCACTGATGTGACGTGTTACCATTGTTCAGCTTCCCCACTGATGTGACGTGTTACCATTGTTCAGCTTCCCACTGATGTGACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2066678 True 594 lncRNA 0.47 1 36944865 36945458

Neighbor

gene id symbol gene type direction distance location
LOC110501806 sema5b coding downstream 107282 36552698 ~ 36837583 (-)
hspbap1 hspbap1 coding downstream 503503 36405741 ~ 36441362 (-)
LOC110502097 LOC106582309 coding downstream 626480 36248076 ~ 36318385 (-)
LOC118943733 NA coding downstream 713589 36231149 ~ 36231276 (-)
LOC118943734 NA coding downstream 715434 36229306 ~ 36229431 (-)
LOC110501809 adcy5 coding upstream 34638 36980096 ~ 37099621 (-)
hacd2 hacd2 coding upstream 160027 37105485 ~ 37117837 (-)
LOC110501816 LOC106582342 coding upstream 412686 37358144 ~ 37390316 (-)
LOC110501817 LOC106582339 coding upstream 453612 37399070 ~ 37411510 (-)
LOC110501818 LOC106582337 coding upstream 487475 37432933 ~ 37528626 (-)
G1806395 NA non-coding downstream 5195 36939401 ~ 36939670 (-)
G1806387 NA non-coding downstream 21022 36923479 ~ 36923843 (-)
G1806386 NA non-coding downstream 21811 36922605 ~ 36923054 (-)
G1806358 NA non-coding downstream 27655 36914343 ~ 36917210 (-)
G1806343 pdia5 non-coding downstream 86699 36838824 ~ 36858166 (-)
G1806403 NA non-coding upstream 17203 36962661 ~ 36972940 (-)
G1806511 NA non-coding upstream 206198 37151656 ~ 37151862 (-)
G1806535 NA non-coding upstream 245597 37191055 ~ 37192056 (-)
G1806539 LOC106582346 non-coding upstream 273518 37218976 ~ 37221865 (-)
G1806558 LOC106582344 non-coding upstream 285862 37231320 ~ 37232061 (-)
G1806393 NA other downstream 8778 36935658 ~ 36936087 (-)
G1805927 LOC106582360 other downstream 885097 36057844 ~ 36059768 (-)
LOC110502094 LOC106582301 other downstream 1725166 35138330 ~ 35471205 (-)
G1803964 NA other downstream 1818032 35126479 ~ 35126833 (-)
G1806449 NA other upstream 98103 37043561 ~ 37112474 (-)
G1807020 LOC105030512 other upstream 814513 37759971 ~ 37760248 (-)
G1807750 LOC106582372 other upstream 1247964 38193422 ~ 38195096 (-)
G1807731 NA other upstream 1263332 38208790 ~ 38241273 (-)
LOC110502145 LOC106586333 other upstream 1630408 38520872 ~ 38726596 (-)

Expression


Co-expression Network