G1806881


Basic Information

Item Value
gene id G1806881
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 37848027 ~ 37848640 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2067242
aacaaaacatacatgtattgtgtaacatgaagtcctatgagtgtcatctgatgaagatcatcaaaggttagtgattcattttatctctatttgtgctttttgtgactcctctctttggctggaaaaatggctgtgtttttctgtgagttggtggtgacctaacataatcatttgtggtgctttcgctgtaaaacctatttgaaatcggacactgtggtgggattaacaacaagattacctttaaaacgatataagatacatgtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaaatgaaaaattgggcgtacaaatttattaagcccctttactttcagtgcagcaaactctctcgagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2067242 True 585 lncRNA 0.37 2 37848027 37848640

Neighbor

gene id symbol gene type direction distance location
LOC110502126 LOC106582321 coding upstream 20982 37824691 ~ 37827045 (+)
LOC110501829 LOC106582324 coding upstream 25276 37821888 ~ 37822751 (+)
LOC110501830 LOC106582325 coding upstream 30330 37815130 ~ 37817697 (+)
LOC110501828 LOC106582323 coding upstream 36266 37804108 ~ 37811761 (+)
LOC110501824 LOC106582328 coding upstream 43191 37803783 ~ 37804836 (+)
LOC110501832 LOC100380630 coding downstream 12852 37861492 ~ 37902868 (+)
coq10b LOC106582315 coding downstream 147445 37996085 ~ 38004691 (+)
LOC110501840 hsp10 coding downstream 163209 38011849 ~ 38015731 (+)
mob3 LOC106582314 coding downstream 163364 38012004 ~ 38029035 (+)
LOC110501842 LOC106586352 coding downstream 231167 38079807 ~ 38213191 (+)
G1806785 NA non-coding upstream 195836 37645788 ~ 37652191 (+)
G1806716 LOC106581475 non-coding upstream 308387 37539406 ~ 37539640 (+)
G1805813 NA non-coding upstream 322894 37524919 ~ 37525133 (+)
G1805796 NA non-coding upstream 351732 37495716 ~ 37496295 (+)
G1805725 NA non-coding upstream 418394 37379675 ~ 37429633 (+)
G1806882 NA non-coding downstream 145 37848785 ~ 37849012 (+)
G1806883 NA non-coding downstream 1638 37850278 ~ 37850545 (+)
G1807088 NA non-coding downstream 60190 37908830 ~ 37912450 (+)
G1807089 NA non-coding downstream 64369 37913009 ~ 37913740 (+)
G1807134 NA non-coding downstream 121722 37970362 ~ 37971174 (+)
LOC110501805 dirc2 other upstream 1404950 36435000 ~ 36520762 (+)
G1805191 NA other upstream 1484097 36363596 ~ 36363930 (+)
G1804873 NA other upstream 1972575 35874562 ~ 35875452 (+)
LOC110501795 LOC106596205 other upstream 2088601 35740427 ~ 35760519 (+)
G1800754 NA other upstream 4933845 32910793 ~ 32914182 (+)
G1807306 NA other downstream 450487 38282124 ~ 38316253 (+)
G1807376 NA other downstream 557497 38406137 ~ 38411163 (+)
G1807566 NA other downstream 1014100 38862740 ~ 38863136 (+)
G1808209 NA other downstream 1300440 39149080 ~ 39151333 (+)

Expression


Co-expression Network