G1809514


Basic Information

Item Value
gene id G1809514
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 40277302 ~ 40277852 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2070275
ggcttgggcgggttgctgtggagggtgccggtcagttgaccggggtagtggtagccaggtgaaaagcgttgccagccgtagagaaatgcttattgaaattctcaattattgtggatttatcggtagtgacagtgtttcctagcctcagtgcagtgggcagctgggaggaggtgctcttattctccatggactttacagtgtcccagaacttttttgagtttgtactacaggatgcaaatttctgtttgaaaagctagccttagctttcctaactgtctgtgcatattggttcctaacttccctgaaaagttgcatatcgcgggggctattcgatgctaatgcagaacgccacaggatgtttttgtgctggtcaagggcagtcagatctggagtgaaccaagggctatatctgttcctggttatacattttttgaatgtagcatgcttatttaagatggtgaggaaggcacttttaaagaataaccaggcatcctctactgacgggatgaggacaatgtcattccaggataccccggccaggtcgattagaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2070275 True 551 lncRNA 0.47 1 40277302 40277852

Neighbor

gene id symbol gene type direction distance location
LOC110502148 rab3gap1 coding upstream 13836 40216020 ~ 40263466 (+)
LOC110501869 ccnt2 coding upstream 76864 40190583 ~ 40200438 (+)
acmsd acmsd coding upstream 91842 40171735 ~ 40185460 (+)
LOC118943662 NA coding upstream 364262 39912913 ~ 39913040 (+)
si:ch73-116o1.2 LOC106582394 coding upstream 364440 39890643 ~ 39912862 (+)
LOC110501870 r3hdm1 coding downstream 80095 40357947 ~ 40418247 (+)
LOC118943589 NA coding downstream 102381 40380233 ~ 40386211 (+)
ubxn4 ubxn4 coding downstream 161312 40439164 ~ 40449478 (+)
nmi LOC106582386 coding downstream 217014 40494866 ~ 40500658 (+)
LOC110501874 LOC106582403 coding downstream 272221 40550073 ~ 40558749 (+)
G1809504 NA non-coding upstream 6737 40270190 ~ 40270565 (+)
G1809499 NA non-coding upstream 9891 40266996 ~ 40267411 (+)
G1809469 NA non-coding upstream 27776 40249239 ~ 40249526 (+)
G1809450 NA non-coding upstream 50619 40226478 ~ 40226683 (+)
G1809516 NA non-coding downstream 1148 40279000 ~ 40279369 (+)
G1809544 NA non-coding downstream 16632 40294484 ~ 40294757 (+)
G1809582 NA non-coding downstream 57689 40335541 ~ 40428461 (+)
G1809774 NA non-coding downstream 238702 40516554 ~ 40516781 (+)
G1809781 NA non-coding downstream 245327 40523179 ~ 40523423 (+)
G1809107 NA other upstream 351907 39924414 ~ 39925395 (+)
G1808787 NA other upstream 582434 39693913 ~ 39694868 (+)
G1808209 NA other upstream 1125969 39149080 ~ 39151333 (+)
G1807566 NA other upstream 1414166 38862740 ~ 38863136 (+)
G1807376 NA other upstream 1866139 38406137 ~ 38411163 (+)
G1810553 NA other downstream 911837 41189689 ~ 41192492 (+)
G1810740 NA other downstream 1186626 41464478 ~ 41466349 (+)
LOC110501889 LOC106582433 other downstream 1978703 42256417 ~ 42389468 (+)
G1812428 NA other downstream 2445820 42723672 ~ 42724114 (+)
LOC110502157 LOC106582435 other downstream 2451749 42688215 ~ 42735867 (+)

Expression


Co-expression Network