Gene
RNA
| Item | Value |
|---|---|
| gene id | G1813578 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 44299230 ~ 44300090 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2074775 | False | 303 | lncRNA | 0.42 | 2 | 44299230 | 44300090 |
| TU2074778 | True | 365 | lncRNA | 0.42 | 3 | 44299230 | 44300090 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502168 | LOC106582452 | coding | upstream | 153348 | 44024275 ~ 44145882 (+) |
| LOC110502167 | LOC106582449 | coding | upstream | 303855 | 43992238 ~ 43995375 (+) |
| LOC118943610 | LOC106576908 | coding | upstream | 320003 | 43976015 ~ 43979227 (+) |
| LOC110501910 | LOC106582449 | coding | upstream | 327818 | 43970398 ~ 43971412 (+) |
| LOC118943642 | LOC106582432 | coding | upstream | 390410 | 43907659 ~ 43908820 (+) |
| LOC110501911 | LOC106582457 | coding | downstream | 26820 | 44326910 ~ 44351877 (+) |
| LOC110501915 | LOC106582460 | coding | downstream | 81462 | 44381552 ~ 44438653 (+) |
| LOC110502170 | LOC106582462 | coding | downstream | 152162 | 44452252 ~ 44463017 (+) |
| LOC110501916 | LOC106582463 | coding | downstream | 168102 | 44468192 ~ 44472868 (+) |
| LOC110501918 | LOC106582467 | coding | downstream | 266773 | 44566863 ~ 44573921 (+) |
| G1813489 | NA | non-coding | upstream | 20114 | 44278810 ~ 44279116 (+) |
| G1813566 | NA | non-coding | upstream | 30028 | 44268556 ~ 44269202 (+) |
| G1813548 | NA | non-coding | upstream | 68885 | 44229414 ~ 44230345 (+) |
| G1813545 | NA | non-coding | upstream | 72358 | 44225703 ~ 44226872 (+) |
| G1813544 | NA | non-coding | upstream | 75206 | 44223181 ~ 44224024 (+) |
| G1813581 | NA | non-coding | downstream | 6947 | 44307037 ~ 44308060 (+) |
| LOC110502169 | LOC106582455 | non-coding | downstream | 13385 | 44148629 ~ 44324651 (+) |
| G1813624 | NA | non-coding | downstream | 173597 | 44473687 ~ 44521500 (+) |
| G1813625 | NA | non-coding | downstream | 174183 | 44474273 ~ 44478751 (+) |
| G1813654 | NA | non-coding | downstream | 184344 | 44484434 ~ 44484903 (+) |
| G1813442 | NA | other | upstream | 188363 | 44108244 ~ 44110867 (+) |
| G1812953 | NA | other | upstream | 1148846 | 43149762 ~ 43150384 (+) |
| LOC110502157 | LOC106582435 | other | upstream | 1563363 | 42688215 ~ 42735867 (+) |
| G1812428 | NA | other | upstream | 1575116 | 42723672 ~ 42724114 (+) |
| LOC110501889 | LOC106582433 | other | upstream | 1909943 | 42256417 ~ 42389468 (+) |
| G1813588 | ino80d | other | downstream | 62571 | 44362661 ~ 44371923 (+) |
| G1813665 | LOC106582464 | other | downstream | 198367 | 44498457 ~ 44508051 (+) |
| G1814811 | NA | other | downstream | 810457 | 45110547 ~ 45111229 (+) |
