G1815466


Basic Information

Item Value
gene id G1815466
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 45548385 ~ 45548871 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2076958
ctgacttgcttaaaccaatgtggtttctaatgacaattaaGCTCTACAAACTATCGCATAAAGGGATAAGAGGAAATccataatttcgattaagacattaatgagtgagctaggaCAGACATAgttaatataactatttgttcagaacttttgaaatgtacagtgacaatTCAGagcatgggccgttcttacagagttctccctgtacaccaagtcagaaccttaggataaataaagggggcatataaatcagacaatgaaagctcttacaatattatatgattacatttctctaaaacaggttatacgCTACacgtgcaccaccaagtcagaacagtaggtgaaattaagagggggAAAATAGACCAGATTATtaaggtgaggcacatgggctactaacagcttaccacacaacatacacttagtatgactttcttagctacagtatacatatctccctggcatattacatcatttatgcagcagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2076958 True 487 lncRNA 0.37 1 45548385 45548871

Neighbor

gene id symbol gene type direction distance location
LOC110501935 gdf3 coding downstream 4395 45533097 ~ 45543990 (-)
LOC118943614 gdf3 coding downstream 27553 45519847 ~ 45520832 (-)
LOC110501936 LOC106572616 coding downstream 89757 45457226 ~ 45458628 (-)
LOC118943595 LOC106582449 coding downstream 116139 45419885 ~ 45432246 (-)
LOC110502174 LOC106572616 coding downstream 182572 45343530 ~ 45365813 (-)
LOC110501933 LOC106582484 coding upstream 1983 45550854 ~ 45578906 (-)
LOC110501943 NA coding upstream 33680 45582551 ~ 45587712 (-)
LOC110501932 LOC106582487 coding upstream 154082 45702953 ~ 45726394 (-)
LOC118943596 NA coding upstream 462244 46011115 ~ 46028506 (-)
ints6 LOC106582497 coding upstream 570517 46119388 ~ 46156972 (-)
G1815463 NA non-coding downstream 1966 45546133 ~ 45546419 (-)
G1815400 NA non-coding downstream 99224 45389697 ~ 45449161 (-)
G1815402 NA non-coding downstream 114659 45392296 ~ 45433726 (-)
G1815396 NA non-coding downstream 133412 45375493 ~ 45414973 (-)
G1815472 NA non-coding upstream 18910 45567781 ~ 45642292 (-)
G1815475 NA non-coding upstream 27652 45576523 ~ 45576888 (-)
G1815482 NA non-coding upstream 36096 45584967 ~ 45585487 (-)
G1815488 NA non-coding upstream 43314 45592185 ~ 45595699 (-)
G1814480 NA other downstream 874497 44673447 ~ 44673888 (-)
LOC110502171 LOC106582464 other downstream 994965 44473683 ~ 44553607 (-)
G1812404 NA other downstream 2870625 42677257 ~ 42677760 (-)
LOC110502155 psd12 other downstream 2943365 42603998 ~ 42605768 (-)
G1812079 LOC106582433 other downstream 3159112 42386822 ~ 42389273 (-)
G1815615 LOC106582489 other upstream 289879 45838750 ~ 45840982 (-)
G1816841 NA other upstream 1676680 47225551 ~ 47226646 (-)
G1816929 NA other upstream 1852251 47400985 ~ 47402047 (-)
G1817287 LOC106582526 other upstream 1922423 47471294 ~ 47473384 (-)
LOC110501953 ihh other upstream 2513178 48057851 ~ 48064453 (-)

Expression


Co-expression Network