XLOC_003729 (HNRNPLL)


Basic Information

Item Value
gene id XLOC_003729
gene name HNRNPLL
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 44300548 ~ 44309032 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007202
TGGTGTGAGACGGAGAGTCACAGGAAGTCAAAGCAGACAGAGTTCATGACATTAATAAAGCAGTGTTCACACGTCGTCTTTAATGTGGCTGAAAGATGCTGTATCAGCTCAGAGACACACAGAATCGCTCCGTCTCCTGTGGTCCATGTTCGGGGTCTCTGTGAGTCTGTGGTGGAGGCTGATCTGGTGGAGTCCTTGGAGAAGTTCGGAAACATCTGTTATGTGATGATGATGCCATTCAAGCGTCAGGCGCTGGTGGAGTTTGAGGAGGTGGAGAGCGCAGACCGCTGTGTGTCGTGTGGATCTCAGGAGGCCGTCTACATCGCCGGTCAGCAGGCCTACTTCAACTACTCCACCAGCAAACGCATCACGAGGCCCACCAACGCAGACGACCCCAACAGCGGGAACAAAGTGCTGCTGCTGTCCATCCAGAACCCGCTCTACCCCATCACTACGGATGTGGTGTACACTGTCTGTAACGCGATCGGGAATATGCTGTGCATCGTTATCTACAAGAGGAACTGCATTCAGGCCATGAGAGAATATCAAACAGAGAGTGTGGGCCtTACCATCCCGAACGCCCAGAAAAACGACAACGACAGCTGGGACTACACCAAACCCTTCCTGACATGTTGGCTGCTGATAAGAGTTTCCTGA
>TCONS_00008699
TCCGTCCTCAGGATAGCGCTCAGAGACACACAAAATAGCCCTGTTGATGATTTAATaactgaattaatgaatgactgaaGGAACtgataaatgaaggaatgaatgaatgaattaattaattaataaatgaatgtggtGTTGATCTGTCATGTCTCTTCAAGACAGCTGCTTAGAGATGCACAGAATTGCTctgtcaatgaatgaatgaatgagtgaatgaatgaatgaatgaatgaatgaatgaatgtggtgTTGATCTGTCATGTCTCTTCAGGACAGCTGCTCAGAGATGCACAGAATTGCTctgtcaatgaatgaatgaatgagtgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgagtgagtgtagtGTTGATCTGTCATGTCTTCCTCCTCAGGACAGCAGCTCAGAGACACACAGAATCGCTCCGTCTCCTGTGGTCCATGTTCGGGGTCTCTGTGAGTCTGTGGTGGAGGCTGATCTGGTGGAGTCCTTGGAGAAGTTCGGAAACATCTGagtgcacAGGTTGATCAGAGCGTCAG

Function

symbol description
hnrnpll Enables mRNA binding activity. Involved in positive regulation of RNA splicing. Located in membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116101

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007202 False 657 mRNA 0.52 7 44300548 44309032
TCONS_00008699 True 573 lncRNA 0.41 2 44301985 44303041

Neighbor

gene id symbol gene type direction distance location
XLOC_003727 NA coding upstream 103677 44163330 ~ 44196871 (+)
XLOC_003726 FO704721.1 coding upstream 162277 44135351 ~ 44138271 (+)
XLOC_003725 FP016005.2 coding upstream 275670 44024762 ~ 44024878 (+)
XLOC_003724 NA coding upstream 349888 43943882 ~ 43950660 (+)
XLOC_003723 NA coding upstream 477695 43821555 ~ 43822853 (+)
XLOC_003730 NA coding downstream 2302 44311334 ~ 44314410 (+)
XLOC_003731 NA coding downstream 8171 44317203 ~ 44318134 (+)
XLOC_003732 CABZ01100185.1 coding downstream 15729 44324761 ~ 44335322 (+)
XLOC_003733 CABZ01100187.1 coding downstream 26634 44335666 ~ 44335780 (+)
XLOC_003734 srsf7b coding downstream 47472 44356504 ~ 44363032 (+)
XLOC_003369 CR854846.2 misc upstream 28177466 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 31588552 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 31606285 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 31614949 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 31620520 12679732 ~ 12680028 (+)
XLOC_003722 NA non-coding upstream 483192 43811629 ~ 43817356 (+)
XLOC_003735 NA non-coding downstream 60095 44369127 ~ 44375182 (+)

Expression


Co-expression Network