XLOC_003723


Basic Information

Item Value
gene id XLOC_003723
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 43821555 ~ 43822853 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008696
gcacagattctgtctggccctggttGTAAgccatcattttttacagtgcacactgACTTCAAGTGTACATGTCATGCAAAGGCATCAGAAGAGTGAATAGTGTTgaggcagcagcagcagctcctgTTTGTTTGCCCGTCGATCGTGCTGCTCATTCTCAGTCCGCATGATTGGACTGAAGTGATCCTGGATCTCGTCTCATTAGAGCAGCAGCTCACGGGGTCAAAGGTCGCCTCAATAACTGCAGCACAAATCAAGCTGGCCGCCTCAGACTTCAGTGCTCTGATTCACAAAAACATCCACTGATTCTCCTGCTGATCCAGAACAGGACTTTTTAACCTAATGTTGGGTCAATTATGGACAAGCCCATTCTTTGGCTTACAGTGTTgcttaaattgaattgaaaacacAATATTGGGTTAAATATAGACAAAACTCAAATGTTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008696 True 446 lncRNA 0.45 2 43821555 43822853

Neighbor

gene id symbol gene type direction distance location
XLOC_003722 NA coding upstream 4199 43811629 ~ 43817356 (+)
XLOC_003721 zgc:153431 coding upstream 34402 43751263 ~ 43787153 (+)
XLOC_003720 ralbb coding upstream 77853 43740949 ~ 43743702 (+)
XLOC_003719 gli2b coding upstream 107805 43661735 ~ 43713750 (+)
XLOC_003718 CABZ01073015.1 coding upstream 174881 43643158 ~ 43646674 (+)
XLOC_003724 NA coding downstream 121029 43943882 ~ 43950660 (+)
XLOC_003725 FP016005.2 coding downstream 201909 44024762 ~ 44024878 (+)
XLOC_003726 FO704721.1 coding downstream 312498 44135351 ~ 44138271 (+)
XLOC_003727 NA coding downstream 340477 44163330 ~ 44196871 (+)
XLOC_003728 NA coding downstream 403347 44226200 ~ 44447359 (+)
XLOC_003369 CR854846.2 misc upstream 27698473 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 31109559 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 31127292 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 31135956 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 31141527 12679732 ~ 12680028 (+)
XLOC_003717 NA non-coding upstream 285665 43532582 ~ 43535890 (+)
XLOC_003712 CABZ01058277.1 non-coding upstream 523922 43295275 ~ 43297633 (+)
XLOC_003710 CABZ01080006.1 non-coding upstream 744214 43070883 ~ 43077341 (+)
XLOC_003730 NA non-coding downstream 488481 44311334 ~ 44314410 (+)

Expression


Co-expression Network