Gene
RNA
| Item | Value |
|---|---|
| gene id | G1817318 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 47518976 ~ 47521583 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2079250 | True | 324 | lncRNA | 0.46 | 3 | 47518976 | 47521583 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trpm2 | LOC106582587 | coding | downstream | 258510 | 47170403 ~ 47260466 (-) |
| LOC110501994 | hnmt | coding | downstream | 415148 | 47086871 ~ 47103828 (-) |
| LOC110501995 | hnmt | coding | downstream | 457649 | 47042225 ~ 47061327 (-) |
| spopla | spopl | coding | downstream | 544844 | 46869775 ~ 46974132 (-) |
| ints6 | LOC106582497 | coding | downstream | 1362004 | 46119388 ~ 46156972 (-) |
| LOC110501961 | LOC106582505 | coding | upstream | 107297 | 47628880 ~ 47635640 (-) |
| ptprna | LOC106582506 | coding | upstream | 211636 | 47733219 ~ 47834254 (-) |
| tmem198a | LOC106582514 | coding | upstream | 375474 | 47897057 ~ 47972131 (-) |
| LOC110501953 | ihh | coding | upstream | 536268 | 48057851 ~ 48064453 (-) |
| LOC110501956 | itgav | coding | upstream | 618178 | 48139761 ~ 48220042 (-) |
| G1817290 | NA | non-coding | downstream | 34536 | 47483730 ~ 47484440 (-) |
| cfap65 | cfap65 | non-coding | downstream | 39528 | 47476398 ~ 47553609 (-) |
| G1816929 | NA | non-coding | downstream | 116929 | 47400985 ~ 47402047 (-) |
| G1816915 | NA | non-coding | downstream | 128580 | 47389657 ~ 47390396 (-) |
| G1816897 | NA | non-coding | downstream | 159476 | 47359037 ~ 47359500 (-) |
| G1817320 | NA | non-coding | upstream | 3538 | 47525121 ~ 47525354 (-) |
| G1817329 | NA | non-coding | upstream | 28238 | 47549821 ~ 47551731 (-) |
| G1817341 | NA | non-coding | upstream | 55406 | 47576989 ~ 47577229 (-) |
| G1817352 | NA | non-coding | upstream | 92633 | 47614216 ~ 47614419 (-) |
| G1817353 | NA | non-coding | upstream | 93599 | 47615182 ~ 47615985 (-) |
| G1817287 | LOC106582526 | other | downstream | 45592 | 47471294 ~ 47473384 (-) |
| G1816841 | NA | other | downstream | 292330 | 47225551 ~ 47226646 (-) |
| G1815615 | LOC106582489 | other | downstream | 1677994 | 45838750 ~ 45840982 (-) |
| G1814480 | NA | other | downstream | 2845088 | 44673447 ~ 44673888 (-) |
| G1817668 | NA | other | upstream | 747204 | 48268787 ~ 48291496 (-) |
| G1817836 | NA | other | upstream | 937443 | 48459026 ~ 48460040 (-) |
| G1817968 | NA | other | upstream | 948015 | 48469598 ~ 48470035 (-) |
| G1818059 | NA | other | upstream | 1105781 | 48627364 ~ 48627846 (-) |
