G1817290


Basic Information

Item Value
gene id G1817290
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 47483730 ~ 47484440 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2079221
ctctcttctatatTCAGGTTCAGTAACTCTCCTCTATATTCAGGTTCAGTAACTCTCCTCTATATTCAGGTTCAGTAACTCTCCTCTATATTCAGGTTCAGTAACTCTCCTCTATATTCAGGTTCAGTAACTCTCCTCTATATTCAGGTTcagtaactctcctctcctctatattcAGGTTCAGTAACTCTCCTCTATATTCAGGTAcagtaactctcctctcctctatattcAGGTTCAGTAACTCTCCTCTATATTCAGGTTCAGTAACTCTCCTCTATATTCAGGTTCAGTAACTCTCCTCTATATTCAGGTTCAGTTACTCTCCTCTATATTCAGGTAcagtaactctcctctcctctatattcAGGTTCAGTAACTCTCCTCTATATTCAGGTTCAGTAACTCTCCTCTATATTCAGGTTCAGTAACTCTCCTCTATATTCAGGTTCAGTAACTCTCCTCTATATTCAGGTTCAGTTACTCTCCTCTATATTCAGGTAcagtaactctcctctcctctatattcAGGTTCAGTAACTCTCCTCTATATTCAGGTTCAGTAACTCTCCTCTATATTCAGGTACagttcatctcctctcctctatattcAGGTACAGttcatctcctcccctctataTTCAGGTTCAGTTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106594117

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2079221 True 654 lncRNA 0.40 2 47483730 47484440

Neighbor

gene id symbol gene type direction distance location
trpm2 LOC106582587 coding downstream 223264 47170403 ~ 47260466 (-)
LOC110501994 hnmt coding downstream 379902 47086871 ~ 47103828 (-)
LOC110501995 hnmt coding downstream 422403 47042225 ~ 47061327 (-)
spopla spopl coding downstream 509598 46869775 ~ 46974132 (-)
ints6 LOC106582497 coding downstream 1326758 46119388 ~ 46156972 (-)
LOC110501961 LOC106582505 coding upstream 144440 47628880 ~ 47635640 (-)
ptprna LOC106582506 coding upstream 248779 47733219 ~ 47834254 (-)
tmem198a LOC106582514 coding upstream 412617 47897057 ~ 47972131 (-)
LOC110501953 ihh coding upstream 573411 48057851 ~ 48064453 (-)
LOC110501956 itgav coding upstream 655321 48139761 ~ 48220042 (-)
cfap65 cfap65 non-coding downstream 4282 47476398 ~ 47553609 (-)
G1816929 NA non-coding downstream 81683 47400985 ~ 47402047 (-)
G1816915 NA non-coding downstream 93334 47389657 ~ 47390396 (-)
G1816897 NA non-coding downstream 124230 47359037 ~ 47359500 (-)
G1816896 NA non-coding downstream 127057 47356075 ~ 47356673 (-)
G1817318 NA non-coding upstream 34536 47518976 ~ 47521583 (-)
G1817319 NA non-coding upstream 35874 47520314 ~ 47527293 (-)
G1817320 NA non-coding upstream 40681 47525121 ~ 47525354 (-)
G1817329 NA non-coding upstream 65381 47549821 ~ 47551731 (-)
G1817341 NA non-coding upstream 92549 47576989 ~ 47577229 (-)
G1817287 LOC106582526 other downstream 10346 47471294 ~ 47473384 (-)
G1816841 NA other downstream 257084 47225551 ~ 47226646 (-)
G1815615 LOC106582489 other downstream 1642748 45838750 ~ 45840982 (-)
G1814480 NA other downstream 2809842 44673447 ~ 44673888 (-)
G1817668 NA other upstream 784347 48268787 ~ 48291496 (-)
G1817836 NA other upstream 974586 48459026 ~ 48460040 (-)
G1817968 NA other upstream 985158 48469598 ~ 48470035 (-)
G1818059 NA other upstream 1142924 48627364 ~ 48627846 (-)

Expression


Co-expression Network