Gene
RNA
| Item | Value |
|---|---|
| gene id | G1817319 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 47520314 ~ 47527293 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2079256 | False | 376 | lncRNA | 0.46 | 3 | 47520314 | 47527293 |
| TU2079252 | True | 263 | lncRNA | 0.46 | 2 | 47524024 | 47527293 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trpm2 | LOC106582587 | coding | downstream | 259848 | 47170403 ~ 47260466 (-) |
| LOC110501994 | hnmt | coding | downstream | 416486 | 47086871 ~ 47103828 (-) |
| LOC110501995 | hnmt | coding | downstream | 458987 | 47042225 ~ 47061327 (-) |
| spopla | spopl | coding | downstream | 546182 | 46869775 ~ 46974132 (-) |
| ints6 | LOC106582497 | coding | downstream | 1363342 | 46119388 ~ 46156972 (-) |
| LOC110501961 | LOC106582505 | coding | upstream | 101587 | 47628880 ~ 47635640 (-) |
| ptprna | LOC106582506 | coding | upstream | 205926 | 47733219 ~ 47834254 (-) |
| tmem198a | LOC106582514 | coding | upstream | 369764 | 47897057 ~ 47972131 (-) |
| LOC110501953 | ihh | coding | upstream | 530558 | 48057851 ~ 48064453 (-) |
| LOC110501956 | itgav | coding | upstream | 612468 | 48139761 ~ 48220042 (-) |
| G1817290 | NA | non-coding | downstream | 35874 | 47483730 ~ 47484440 (-) |
| cfap65 | cfap65 | non-coding | downstream | 40866 | 47476398 ~ 47553609 (-) |
| G1816929 | NA | non-coding | downstream | 118267 | 47400985 ~ 47402047 (-) |
| G1816915 | NA | non-coding | downstream | 129918 | 47389657 ~ 47390396 (-) |
| G1816897 | NA | non-coding | downstream | 160814 | 47359037 ~ 47359500 (-) |
| G1817329 | NA | non-coding | upstream | 22528 | 47549821 ~ 47551731 (-) |
| G1817341 | NA | non-coding | upstream | 49696 | 47576989 ~ 47577229 (-) |
| G1817352 | NA | non-coding | upstream | 86923 | 47614216 ~ 47614419 (-) |
| G1817353 | NA | non-coding | upstream | 87889 | 47615182 ~ 47615985 (-) |
| G1817368 | NA | non-coding | upstream | 117077 | 47644370 ~ 47645779 (-) |
| G1817287 | LOC106582526 | other | downstream | 46930 | 47471294 ~ 47473384 (-) |
| G1816841 | NA | other | downstream | 293668 | 47225551 ~ 47226646 (-) |
| G1815615 | LOC106582489 | other | downstream | 1679332 | 45838750 ~ 45840982 (-) |
| G1814480 | NA | other | downstream | 2846426 | 44673447 ~ 44673888 (-) |
| G1817668 | NA | other | upstream | 741494 | 48268787 ~ 48291496 (-) |
| G1817836 | NA | other | upstream | 931733 | 48459026 ~ 48460040 (-) |
| G1817968 | NA | other | upstream | 942305 | 48469598 ~ 48470035 (-) |
| G1818059 | NA | other | upstream | 1100071 | 48627364 ~ 48627846 (-) |
