Gene
RNA
| Item | Value |
|---|---|
| gene id | G1818144 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 48781229 ~ 48781506 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2080296 | True | 278 | lncRNA | 0.44 | 1 | 48781229 | 48781506 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502188 | LOC106582504 | coding | downstream | 135308 | 48505445 ~ 48645921 (-) |
| LOC110501956 | itgav | coding | downstream | 561187 | 48139761 ~ 48220042 (-) |
| LOC110501953 | ihh | coding | downstream | 716776 | 48057851 ~ 48064453 (-) |
| tmem198a | LOC106582514 | coding | downstream | 809098 | 47897057 ~ 47972131 (-) |
| ptprna | LOC106582506 | coding | downstream | 946975 | 47733219 ~ 47834254 (-) |
| LOC118943644 | NA | coding | upstream | 180706 | 48962212 ~ 48964633 (-) |
| LOC118943599 | NA | coding | upstream | 688596 | 49470102 ~ 49480960 (-) |
| prkag3b | LOC106592041 | coding | upstream | 1341382 | 50122888 ~ 50243945 (-) |
| si:ch211-67e16.4 | LOC106582542 | coding | upstream | 1678588 | 50460094 ~ 50465680 (-) |
| si:ch211-67e16.3 | LOC106582540 | coding | upstream | 1690241 | 50471747 ~ 50484670 (-) |
| G1818136 | NA | non-coding | downstream | 1778 | 48773696 ~ 48779451 (-) |
| G1818140 | NA | non-coding | downstream | 3137 | 48777392 ~ 48778092 (-) |
| G1818122 | NA | non-coding | downstream | 15870 | 48765064 ~ 48765359 (-) |
| G1818120 | NA | non-coding | downstream | 19962 | 48759355 ~ 48761267 (-) |
| G1818110 | NA | non-coding | downstream | 29444 | 48751494 ~ 48751785 (-) |
| G1818197 | NA | non-coding | upstream | 71064 | 48852570 ~ 48852810 (-) |
| G1818218 | NA | non-coding | upstream | 101454 | 48882960 ~ 48883186 (-) |
| G1818227 | NA | non-coding | upstream | 107497 | 48889003 ~ 48889251 (-) |
| G1818232 | NA | non-coding | upstream | 112971 | 48894477 ~ 48894916 (-) |
| G1818252 | NA | non-coding | upstream | 144688 | 48926194 ~ 48931697 (-) |
| G1818059 | NA | other | downstream | 153383 | 48627364 ~ 48627846 (-) |
| G1817968 | NA | other | downstream | 311194 | 48469598 ~ 48470035 (-) |
| G1817836 | NA | other | downstream | 321189 | 48459026 ~ 48460040 (-) |
| G1817668 | NA | other | downstream | 489733 | 48268787 ~ 48291496 (-) |
| G1818393 | NA | other | upstream | 344008 | 49125514 ~ 49126117 (-) |
| G1818417 | NA | other | upstream | 384245 | 49165751 ~ 49166367 (-) |
| G1818802 | NA | other | upstream | 936126 | 49717632 ~ 49719378 (-) |
| G1819189 | NA | other | upstream | 1427968 | 50137937 ~ 50219233 (-) |
| G1819250 | NA | other | upstream | 1520295 | 50301801 ~ 50305038 (-) |
