XLOC_037533


Basic Information

Item Value
gene id XLOC_037533
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 434375 ~ 437803 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075251
AAAACACATCCAAAACTTATAAGAATGAGCACAAGCCTCAGTTTAGACCATCTGCTTGATGAACAGACCCCTAGCTAAAACctcaatatatgaaataaaaagtaaaaccttTTGaacttaatgtttacaatgcaaatccaattagatcctctttatttggtaaacaaagcaagtctctcacgTATGACTGCAcacactgcattgtacataaatcagatgaacactttagtcagtaatattactgtaattatttaaaaactgaataaataaagatttgaacacatttatacaagtaaataaacagaattaatgatgggctaaacatcTGCAGACTTCTGtgtgcacagattccgtgtgggctttGTGATGACTTTCATGGCTTTCTTCAAGGCAGATTGCTGACAGCAGACGTTTTAGGATAGTTTGTGGTTTGATTAATTTTAACACCACTTGatgaaatgttcatttttctGTGACCCGTGTCTCTTTAACTGTAAGAGTAATGCTTTATACTACAGCATTTATCCATCAGTGTTAATCTCCTCCACCCACAGAACACCTCCCTCCAGCAACAGACCCTCAGGAGAGAAAAGCAGACGCTGAAGAGAGAACAGAAGAGCCGGAGAACACTGATGCTGAAAATACAGAGGAAACTCGTTTAGCAGAAACTACTGAAACCACTGAAGGAGCGACTGAAGCAGGAGATGCAGAGGATGTGGACACTAATGCAGAGGATGGAGACTGACAGCACGACAGCAGAAATAACTTAAACACCAACACAATCTCTCAGGCAAAAACATGGTGCTTCAGCAAATAAATCAGTGGAGGATGAGAACTGAGGGCCAGATTACTGAAAGGAGTCAGTTACAATAACAatgtgttaatgtatttaccaacatgaacaaacaacacaTTCACAGTATCACATTACATTAGTTGGAGATTTTTACTTTgtgcatttactaatgttaacaagcatgaatttacaTGTTAATAgagtattagtaaatgttgaactgatTAATAAACACTGCACAAGTATCCTTCATTATTGTGAAGCATGACCATGGGGTTAGGAAATCTGGTGTATCAGGGTGTCAATCATTTACTATActcaactaaaaataaataatgcacaaaagcacacacacaatttaaaatgGGTGCTCAAACAAGcaatttctttttctcttttggtgttgctgcctttgtacattttatattaaacataGCCTAATTCATGAAGCAGTCATTTCACAGAACTACTGCACATGGTTTTACTTGATTAAAGCCTACTTGTATTAAACAGCTAATCATTGGCTTCTTTATAGTCAAGGTAGCAGTAGGGTTGAAGTATTAGAGATGCAGAGTAAGATCATCAGAATAAAGCTGAAGGTCACACAGCATCTTCCCTATTAACATGCACATGAAGTGGAAACACAAGCTCGTGACAAGTTTTGCAGCTCGCCGTGTTGGAATGTTCAGACTTGAagtctgacctgtgaaatcacatcaagattgcgtgagaccaatccaACTCCAGCGTGACCACAGCTTAAAACAATCCGAGTAACGTAATCAGTGATGTTAGTGAGTGAAGCATCTGAAATAAAGGACTAGAATGCAGTCAATAAGTTCAAGTTTAAAAATAACAGTTCATGACACTTCAGCATCAATTCTCCACTGCACATAGTAGATAGACAAAACATTATTgctcaactatttttttttctttcactgttGCACGTAGTAAATCTGACCTCAAGCGTTCCAAGTGGACTGTAAATAACCTTCAGTTTACACCAGTACCATTTCTCAGATCAGTCAGCAGCAGGGTTCATCATGGGTTGTGTTGAATGGACTAAAC
>TCONS_00075252
CCTCAAAACACATCCAAAACTTATAAGAATGAGCACAAGCCTCAGTTTAGACCATCTGCTTGATGAACAGACCCCTAGCTAAAACctcaatatatgaaataaaaagtaaaaccttTTGaacttaatgtttacaatgcaaatccaattagatcctctttatttggtaaacaaagcaagtctctcacgTATGACTGCAcacactgcattgtacataaatcagatgaacactttagtcagtaatattactgtaattatttaaaaactgaataaataaagatttgaacacatttatacaagtaaataaacagaattaatgatgggctaaacatcTGCAGACTTCTGtgtgcacagattccgtgtgggctttGTGATGACTTTCATGGCTTTCTTCAAGGCAGATTGCTGACAGCAGACGTTTTAGGATAGTTTGTGGTTTGATTAATTTTAACACCACTTGatgaaatgttcatttttctGTGACCCGTGTCTCTTTAACTGTAAGAGTAATGCTTTATACTACAGCATTTATCCATCAGTGTTAATCTCCTCCACCCACAGAACACCTCCCTCCAGCAACAGACCCTCAGGAGAGAAAAGCAGACGCTGAAGAGAGAACAGAAGAGCCGGAGAACACTGATGCTGAAAATACAGAGGAAACTCGTTTAGCAGAAACTACTGAAACCACTGAAGGAGCGACTGAAGCAGGAGGAGATGCAGAGGATGTGGACACTAATGCAGAGGATGGAGACTGACAGCACGACAGCAGAAATAACTTAAACACCAACACAATCTCTCAGGCAAAAACATGGTGCTTCAGCAAATAAATCAGTGGAGGATGAGAACTGAGGGCCAGATTACTGAAAGGAGTCAGTTACAATAACAatgtgttaatgtatttaccaacatgaacaaacaacacaTTCACAGTATCACATTACATTAGTTGGAGATTTTTACTTTgtgcatttactaatgttaacaagcatgaatttacaTGTTAATAgagtattagtaaatgttgaactgatTAATAAACACTGCACAAGTATCCTTCATTATTGTGAAGCATGACCATGGGGTTAGGAAATCTGGTGTATCAGGGTGTCAATCATTTACTATActcaactaaaaataaataatgcacaaaagcacacacacaatttaaaatgGGTGCTCAAACAAGcaatttctttttctcttttggtgttgctgcctttgtacattttatattaaacataGCCTAATTCATGAAGCAGTCATTTCACAGAACTACTGCACATGGTTTTACTTGATTAAAGCCTACTTGTATTAAACAGCTAATCATTGGCTTCTTTATAGTCAAGGTAGCAGTAGGGTTGAAGTATTAGAGATGCAGAGTAAGATCATCAGAATAAAGCTGAAGGTCACACAGCATCTTCCCTATTAACATGCACATGAAGTGGAAACACAAGCTCGTGACAAGTTTTGCAGCTCGCCGTGTTGGAATGTTCAGACTTGAagtctgacctgtgaaatcacatcaagattgcgtgagaccaatccaACTCCAGCGTGACCACAGCTTAAAACAATCCGAGTAACGTAATCAGTGATGTTAGTGAGTGAAGCATCTGAAATAAAGGACTAGAATGCAGTCAATAAGTTCAAGTTTAAAAATAACAGTTCATGACACTTCAGCATCAATTCTCCACTGCACATAGTAGATAGACAAAACATTATTgctcaactatttttttttctttcactgttGCACGTAGTAAATCTGACCTCAAGCGTTCCAAGTGGACTGTAAATAACCTTCAGTTTACACCAGTACCATTTCTCAGATCAGTCAGCAGCAGGGTTCATCATGGGTTGTGTTGAATGGACTAAAC

Function

GO:

id name namespace
GO:0044420 obsolete extracellular matrix component cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075251 False 1867 lncRNA 0.37 2 434375 437799
TCONS_00075252 True 1874 lncRNA 0.38 2 434375 437803

Neighbor

gene id symbol gene type direction distance location
XLOC_037532 CR753874.2 coding downstream 19887 407678 ~ 414488 (-)
XLOC_037531 si:dkey-11f4.7 coding downstream 30608 396346 ~ 403767 (-)
XLOC_037530 si:dkey-11f4.7 coding downstream 40287 391499 ~ 394088 (-)
XLOC_037529 si:dkey-11f4.7 coding downstream 43501 387317 ~ 390874 (-)
XLOC_037528 si:dkey-11f4.7 coding downstream 59682 373635 ~ 374693 (-)
XLOC_037534 si:dkey-11f4.14 coding upstream 2393 440196 ~ 443451 (-)
XLOC_037535 zgc:91849 coding upstream 7668 445471 ~ 456541 (-)
XLOC_037536 si:dkey-11f4.16 coding upstream 20948 458751 ~ 460730 (-)
XLOC_037537 si:dkey-11f4.16 coding upstream 23340 461143 ~ 470097 (-)
XLOC_037538 dip2a coding upstream 147137 584940 ~ 695000 (-)
XLOC_037520 NA non-coding downstream 184942 228667 ~ 249433 (-)
XLOC_037521 NA non-coding downstream 185390 243961 ~ 248985 (-)
XLOC_037519 NA non-coding downstream 217848 204557 ~ 216527 (-)
XLOC_037541 NA non-coding upstream 319790 757593 ~ 758416 (-)
XLOC_037542 NA non-coding upstream 335060 772863 ~ 773656 (-)
XLOC_037546 NA non-coding upstream 442945 880748 ~ 889567 (-)
XLOC_037549 CABZ01066922.1 non-coding upstream 565638 1003441 ~ 1003555 (-)
XLOC_037550 NA non-coding upstream 589212 1027015 ~ 1028650 (-)

Expression


Co-expression Network