XLOC_037529 (si:dkey-11f4.7)


Basic Information

Item Value
gene id XLOC_037529
gene name si:dkey-11f4.7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 387317 ~ 390874 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073747
AATCACCTGTTGATTTTAGGTCTGCTTGTGGTGGACGTGACGGTCCATCGACACCAGCTCCACCACCGCCTCCAACACGGCCTAAAAACAGCAAACAGCAGCATCATATTTCAGGCTGTCACACACCATCACCTGGACCACGGCATCCTGCCCTCCGTcaaatattttgttaattatttcttCTACAAGTTTGGTTTAGAGGTGTGTTTTGTGGTAGCGGTGAACGTGATTGGCCAGCGGATGGATCTCTGTGCGCTTCTGCACTCCTTGGCTCTTATGGTGGTTCTGGCTCGTCGGCGCAGGAAAGCCATTGGAGAAGTCTGGCCAAAATACTGCAGCTTCATCGCCAGCTTCATGGTGCTGCAGTACCTGCTGTGCATCGGTGTACCACCGGCCCTCTGCAGCGATTATCCCTGGAGGAGTTCCTCTCCGGCTTTGAGTTCTAACCTGATAAAGTGGCTGTATCTCCCAGACCACGCCATGAGTCCCAACGCCACCTTCATCCTCTATGACTGTCTGCTGCTGCTGGTGGCGTCGCTGCAGTGGAAGGTGTTCGAGGAGGAAAATCAGGCCTGTGTGAGACTCCTCGCTGGAGAAAACGTGGAGATCAGCCGGAATCTGGATCCACAGACACTCAATCAGTACACTCCTGTCAACAACTTCCTTCACTGCCGGTCATATCTGGACATGGTGAAGgtgtttgtgttcagttattTTTTCTGGCTGGTGTTGTGCCTCATCTTCATCACGGGAACCACCAGGATTAACATGCTGTGTCTGGGTTATCTGGTGGCCTGCTTCTACTTCATGCTGTTCGGAGGCACATTACTGCTGCAGCCGGTGCAGTATGTGCTGAGACTGTGGGACGCTCTGATAGCATACACCTGCGTGGTCATCAGCCTCAAAAACTTGCTGTCG

Function

symbol description
si:dkey-11f4.7 Predicted to enable mechanosensitive ion channel activity. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008381 mechanosensitive ion channel activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-361 Predicted to enable mechanosensitive ion channel activity. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000099207

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073747 True 918 mRNA 0.52 5 387317 390874

Neighbor

gene id symbol gene type direction distance location
XLOC_037528 si:dkey-11f4.7 coding downstream 12624 373635 ~ 374693 (-)
XLOC_037527 si:dkey-11f4.7 coding downstream 17092 365596 ~ 370225 (-)
XLOC_037526 si:dkey-11f4.7 coding downstream 24346 360252 ~ 362971 (-)
XLOC_037525 zgc:158320 coding downstream 30816 354868 ~ 356501 (-)
XLOC_037524 ndufa4l2a coding downstream 59416 323460 ~ 327901 (-)
XLOC_037530 si:dkey-11f4.7 coding upstream 625 391499 ~ 394088 (-)
XLOC_037531 si:dkey-11f4.7 coding upstream 5472 396346 ~ 403767 (-)
XLOC_037532 CR753874.2 coding upstream 16804 407678 ~ 414488 (-)
XLOC_037533 NA coding upstream 43501 434375 ~ 437803 (-)
XLOC_037534 si:dkey-11f4.14 coding upstream 49322 440196 ~ 443451 (-)
XLOC_037520 NA non-coding downstream 137884 228667 ~ 249433 (-)
XLOC_037521 NA non-coding downstream 138332 243961 ~ 248985 (-)
XLOC_037519 NA non-coding downstream 170790 204557 ~ 216527 (-)
XLOC_037541 NA non-coding upstream 366719 757593 ~ 758416 (-)
XLOC_037542 NA non-coding upstream 381989 772863 ~ 773656 (-)
XLOC_037546 NA non-coding upstream 489874 880748 ~ 889567 (-)

Expression


Co-expression Network