XLOC_037525 (zgc:158320)


Basic Information

Item Value
gene id XLOC_037525
gene name zgc:158320
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 354868 ~ 356501 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073743
GGAAGCAGAACCAGTGTTTTCATTTCAGCAAATTTCCACATATAACTGAGTTATATTCGCCATGGTTCTGAACTGTGCTTATCCCGGATGCCTGAATCTGTTCAAGAAAGAGAGGCTGCGCTCGAACTCCTCATCGCACGGCGGAAAGCTGACCTTCCACCGCTTCCCGACGCTGGAGCCCGGGCGGCTGCTGCTGTGGCGGGCGGCGCTCGGGATGGACCCGGACACACCCATGAGGAGCCTGCGGGTCTGGAGGATCTGCAGTGAACACTTCTCCCCGGAGGACTTCAGAGCCGTTAACGGGAATAAAGTCCTGCTCAAAGCTTCAGCGGTGCCCAGGGTTTACTCCACACCGGCTCCGGGCAGTCGTGCTGAATCTGCTCAAGCAATGCAAGACTGTAAGGAAGAGGAGACTGAGTTACTAGTTTCAGAAGCCGAAGGTGTTTCAGAGTCCAGACCACAGTTACATCACAGCTACACACTTCCAGCGGCACAGTCCATGCATGCGGATGAACCATCAAAGCGAGAAGAGCATCCCGAGGGAAGACCTGACCTGAACATCATCAAACTCCCATCATGTTCACCGTCAGCAAAGGATGGAGTTGGTTTCCCATACACTTCCCGtcctgctgcacacacacacaccgcagcagCAGCGGGATCATCAGAGAAGCTTGTGCTGAAGGAAAGGCAGTGGATTGTGAGCGAGTCGAGCGTGATGGATCTGTTCAGGAGATGCCAGCAGTGCGGCGCTCTCATCACTGACACCAGAACCGTGATTTCCGGCTGCCTGCTGCGGGTGTACTGGGAATGCGCTCAGAGACACATCGGCCAGTGGAACTCCTGCTCCGGCATACAGGCGCTACTGTCCAACCTGTGCCAGAAAGCGCTGGAGCCGCCCAGGCACAGCGCAGAGATCAGACGAGGCGTGAGACGCTAACCCAAGCTTTCACCATagttttaaatacacattttctgCTCCACCATTTCAAGACATATGTACAGATGAAAAGTCCAAATCAtcagcacactgccactttaactCTCAAAACACTGATTTAGTCGGACACCGACACGGTCTTCATCAGGTGTAGATGCGTGCGGCTGCAGCtgagaggatcacatgagctCTTCTGGTGCTCACATTGGCTGACGTTCACTAAAGtctctcttcatttgcataaagcagatttaaataaacacatacctTTCTAAAGCA

Function

symbol description
zgc:158320 Predicted to enable metal ion binding activity and sequence-specific DNA binding activity. Predicted to be located in nucleoplasm.

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0003677 DNA binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061201-33 Predicted to enable metal ion binding activity and sequence-specific DNA binding activity. Predicted to be located in nucleoplasm.

Ensembl:

ensembl_id ENSDARG00000099373

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073743 True 1219 mRNA 0.53 3 354868 356501

Neighbor

gene id symbol gene type direction distance location
XLOC_037524 ndufa4l2a coding downstream 26967 323460 ~ 327901 (-)
XLOC_037523 kif5aa coding downstream 48353 265988 ~ 306515 (-)
XLOC_037522 pcbp2 coding downstream 90695 250724 ~ 264173 (-)
XLOC_037520 NA coding downstream 105435 228667 ~ 249433 (-)
XLOC_037521 NA coding downstream 105883 243961 ~ 248985 (-)
XLOC_037526 si:dkey-11f4.7 coding upstream 3751 360252 ~ 362971 (-)
XLOC_037527 si:dkey-11f4.7 coding upstream 9095 365596 ~ 370225 (-)
XLOC_037528 si:dkey-11f4.7 coding upstream 17134 373635 ~ 374693 (-)
XLOC_037529 si:dkey-11f4.7 coding upstream 30816 387317 ~ 390874 (-)
XLOC_037530 si:dkey-11f4.7 coding upstream 34998 391499 ~ 394088 (-)
XLOC_037519 NA non-coding downstream 138341 204557 ~ 216527 (-)
XLOC_037532 CR753874.2 non-coding upstream 51177 407678 ~ 414488 (-)
XLOC_037533 NA non-coding upstream 77874 434375 ~ 437803 (-)
XLOC_037541 NA non-coding upstream 401092 757593 ~ 758416 (-)
XLOC_037542 NA non-coding upstream 416362 772863 ~ 773656 (-)
XLOC_037546 NA non-coding upstream 524247 880748 ~ 889567 (-)

Expression


Co-expression Network