XLOC_037604 (cytip)


Basic Information

Item Value
gene id XLOC_037604
gene name cytip
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 5253137 ~ 5263947 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073853
agaataattagcatagctgttgttcatagtgtatgtaaacaagatgcagaaacctgtgtggaaacctgctaagtgtatgctttactaaacagataggtctttaatctagttttgagtTATCAGGacggctattccagagtttaggagccataaatgagaaggctcaacctcctttacttgactttgctattctaggttctaccagaagccctgagttttgaaatcttaaagagcgagttaaagttagttagttaaataaacaggagctagattatttaaagctttattggtaagaagcaatattttaaatgcaatacgaatcttaacaggcagccagtgtaaggaggataaaattggggtgatatgacaAAACTCATCCTGCATGTTTGTTCTCAGACTACTGCAAATTCACAAGAGCTCAAAGCTTAAAAAGGAAACTGGCAGATGTCTTTAGTTCCTGACATTCACGTGATGTGGCTATATCCGCTGTAGACTGCAGTTGTGCGAATTCACACTGATGCCTGCAGTTGTGTGCAGCGCTTCTGTGAATGAGGCATGATGACATCCAATAGGAActttaaaatgcctttaaaacagatGAGCAGCCTGGACAGCTACATAATCGACAGCTCTCAAAAGAAGAGAAGCATACTGTGGCGACAGCGCTCTTTCAGCAGTCCCAAAAATCTGAACACTGAAGGGATGAAAGGCAGGACATTGTCACAGAGTCAGttgGCCAGAACACACTCAAATTCACTGGTGGATTATACTGATCCTCAGAGAACAATGGTTGTACTGGAGAAACAAGACAATGAAGTGTTTGGATTCGAAGTTCAAACATATGGTTTGAAGGTGAAAAACACCAGTATGGTAGAGATGTGCACTTTCGTGTGCAGGGTCCAGGATGGCAGTGCAGCGGAAACTGCAGGTTTAACTGCTGGTGACATCATATTGTCAGTAAATGGTGTGAGCATTGAGGGTTCCACACACCAGAACATTATCGAGTTGATTCGAGAATCCTCTAACACGCTGAAGTTGGAAACAGTCAGTGGGAGTGTCATGAAGAGGATTGAATTAGAGAAAAAGATGCACTATCTTAAGCAAACTCTTCGTGAGAAATGGGTGGAACTGCAATCTCTCACACTCAAAGAAAAACGCCTTACTCaagGTAATCTAAATGAGAGTGCTCAGTATCTGTCTGTTGACTCGGTAATGTCTCTCTCATCTCCAATGGGTCGCTCTGGGCAACGCTTTTCCAGCGACAGCAGTTGTCGCAGCATAATGACAGATGACAGCGAGGATGGTGCCTTCATGTCATCAGTATTTGATGACTCAAGTCCATTAAGCCCAATTGAGTCAAGCGGAAGCTTCTTCCAGCTGGAAGTGGGGGCATTGCGACCCATAACAAGAACACGCAGCATTAGCCTGACCGGCAGTAACAGTTCACTCTCCCCAGGCTGGGAAACTTCACCTTCATCTTTGTTCGGCACTCTTCCAAGAAGAAGCAGAAAAGGTAGTGTCAGGAAACACCTTCTGAAGTTCATACCCGGACTGAATCATTCTGTTGAGGAAGAGGAGTGCAGCTAAAAAACTGCTGATCTGATTAATTAAGGACCTTAAGCAGATAAAGGATCATACCGGTTTATATATGTCATACAAGAACTTGACTTTACATCTTTAAGTCGTGTTGAAAAGCGAAATGGAGTCCCACATGAGCATTATAGACTGGATATTGTCAATCTCTATATAATGTACTTTTCTTGTCAGTGGATCTGCACTGAAACAAACAACTGGCATTAATTGAACATTAACAGCGTGCATTCTAAATGGCAACTGCGTTGAAAGAATATTGTGAACATTGAGAAAATAATGTGAACATTACTTCTACTGCTCTAATACAGTGGTTAGAACTCGAGACTTGGAAgtgtctaaatcaggggtgtacaaactcggtcctggagggtttagctccaaccctaatcaaaccagcctgatctcacgagaaaacgtaagtattttacgttttgccagtttagtggctaatttgtacgaattcgtacgagtttagtcgtacgaaattgtacgattttaaaaaggaggcgtggcacctaaccccacccctaaacccaaccgtcattgggggatgagcaagtcgtactaaattgtacgaattcatacgaattagccactaaatccaaatgttacgaattgccttgagattgtgttgaatcaaacacacctgaaccagctaatcaagctcttgctaggtATACTAGGAACtacctggcaggtgtgttaaagcaagttggagctaaactgtgcaggacaccggactgagcttggacacccctggtctaaatgtttttatttctagCTTGATTCTCTTGATCTTTGAGTCTTGGAAGCTTCTAAATGTGTCTATTTCCAGCTTGATCTTTTATGTAACTAATCAAGATCATATGCTGTAGCATGCAAATGAGGTGTTGGTTTGTTGACAAAAGCATAACGTGTATGGCTGTAGAGAGCAGTGGCATGGAACATTGTTGTACTGTAGCAGTGCAAGGAAAGTTACATGTTTTCAGGTGGTCTGTGAAAATACCTGTGCTGCAAGTGCTTTCAAATCAACCAGATTTTACAGGTACTGTAGGTTTAGATGCAGGCTAGGGTTTCACTGTGATTTATATGTAGGTAAATGCTAAGAGTAAATTAGCTTGTCAGTTTACATCATGAAAACGGACTGATCTTGGCAGTGTGTGTGATATGAAAGTTAAGAGCTGATGAGTGACAGAGCTCCAAACCACAGAAAGTATAGAAAGGTTCATAACAGGATGTGGTCTGAGGTACTaccaactacttttttttttttttgctttcttgaGTTATGCCTGTAACAGACAGACTGTAAGTTTTACGAAATGTAAAAACATAAGTAAAACAGAAGCGCTTGGTatgtcattctttctttttttttttcttgcttgttttaatgtaaaGGTTGGAAAGCAAATGTTACCTGAAAAAAGTTATCTTCTAGTCACCAGCATACAATTACAGGAAGTATATGTGCGTGACATATACACACTTAATTCAACAGGAAGAGACTAAAGAATTAacaatataaaatgcatttatattttcacatttgtgtcatgcttattaatatttttattaaaaaaatcatcaCAATGTGCTTGAATAAATTAACAGGTTTAATCCTATACACCGA

Function

symbol description
cytip Orthologous to human CYTIP (cytohesin 1 interacting protein).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-140106-76 Orthologous to human CYTIP (cytohesin 1 interacting protein).

Ensembl:

ensembl_id ENSDARG00000061717

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073853 True 3226 mRNA 0.40 8 5253137 5263947

Neighbor

gene id symbol gene type direction distance location
XLOC_037603 nr4a2a coding downstream 206822 5040985 ~ 5046315 (-)
XLOC_037602 NA coding downstream 385698 4866100 ~ 4867439 (-)
XLOC_037601 fmnl2a coding downstream 396370 4730398 ~ 4856767 (-)
XLOC_037600 galnt13 coding downstream 646674 4538527 ~ 4606463 (-)
XLOC_037599 kcnj3a coding downstream 741524 4478199 ~ 4511613 (-)
XLOC_037605 ACVR1C coding upstream 7577 5271524 ~ 5318873 (-)
XLOC_037606 tnfsf13b coding upstream 61068 5325015 ~ 5337923 (-)
XLOC_037607 abhd13 coding upstream 81289 5345236 ~ 5351017 (-)
XLOC_037608 CCKBR coding upstream 512412 5776359 ~ 5805229 (-)
XLOC_037609 GPR89B coding upstream 629661 5893608 ~ 5916755 (-)
XLOC_037598 FP102171.1 non-coding downstream 806033 4443918 ~ 4447104 (-)
XLOC_037589 NA non-coding downstream 1857616 3358397 ~ 3395521 (-)
XLOC_037588 NA non-coding downstream 1972686 3265568 ~ 3280451 (-)
XLOC_037587 FP236594.1 non-coding downstream 2098851 3153726 ~ 3154286 (-)
XLOC_037613 FQ377643.1 non-coding upstream 1145210 6409157 ~ 6409271 (-)
XLOC_037614 NA non-coding upstream 1267602 6531549 ~ 6548796 (-)
XLOC_037618 BX842683.1 non-coding upstream 1453730 6717677 ~ 6717801 (-)
XLOC_037626 BX942813.1 non-coding upstream 2093872 7357819 ~ 7359484 (-)
XLOC_037631 NA non-coding upstream 2235313 7499260 ~ 7505531 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location