XLOC_037616 (GPR45)


Basic Information

Item Value
gene id XLOC_037616
gene name GPR45
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 6623536 ~ 6624663 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073871
ATGTTTGCATGTAATGGCAGCTCATTGGAGGCATGCGGCCTTCTCGAACCAACGGAAACCGAGATGCAAGAGGCTGATACTGCCCTCATGCCCACCACTCTCAGGGTGGCACTGGCTGCCATAATGATCTTCATGATCACCATAGGTTTCCTTGGCAATGGCATTGTGTGTCTAATAGTGTATCAGAAGCCTGCAATGCGTTCAGCTATAAATCTGCTCTTAGCCACACTGGCGTTTTCTGACATCATGCTGTCACTGCTATGCATGCCATTCACCGCCGTCACTCTCGCAACTACGGACTGGAGCTTTGGAATGGGATTCTGTCGTGTTTCCGTCATGTTATATTGGCTGTTTGTTCTAGAAGGGGTGTCTATCCTTCTGATCATCAGCGTTGATCGATTCCTCATTATTGTTCAACGGCAGGACAAGCTGACTCCACATCGGGCAAAAATCCTCATTGGCGCATCATGGGCTCTGTCGCTTTGCGTGTCCCTACCATCTCTTGTTGGTTGGAGGACAGCAGGGATTGGGGCACAAGTGCCACAGTGCATTCTGGGATACAGCGAATCCCTGGCAGACCGGGGTTACACAGTACTGCTTGCAGTCGCTGTGTTTTTTGTGCCGTTTGGTGTGATGTTGTATTCATACCTATGTATTCTCAATACGGTTCGACGGAATGCTCTGCGCATCCACAATCACACTAGTGAAGGCAGCGTTGCAATCAGCCATGTCAGCAAGTTGGGTTTAACCGGTTTACAGCGGCCCCAAGTCAACATAGACATGAGTTTCAAAACAAGAGCCTTCACTACCATCCTTATCCTTTTCATTGGCTTCTCCGTGTGCTGGTTGCCACACACAGTGGTGAGTCTGTTGTCGGTGTTCAGCAGACGCTTCTACCTCAGCCCTGCATTTTACCCAGTGAGCATCGGGGCTCTTTGGTTGAGCTACCTAAAAGCGGTCTTCAACCCGGTGATATACTGCTGGAGAATCCGAAAGTTTCGAGAGGCCTGTCTGGAGTTTATGCCCAAGACCTTTCATCTGTGTCCAAAGATTCCAGGCCGAAGTCGCAGGCGCATAAGGCCCAGCAACATCTATGTGTGCAGCAGCGAGACTCAGTCTTCAGTCTAG

Function

symbol description
gpr45 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human GPR45 (G protein-coupled receptor 45).

GO: NA

KEGG:

id description
ko04030 G protein-coupled receptors

Ensembl:

ensembl_id ENSDARG00000063357

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073871 True 1128 mRNA 0.50 1 6623536 6624663

Neighbor

gene id symbol gene type direction distance location
XLOC_037615 C9H2orf49 coding downstream 5469 6607514 ~ 6618067 (-)
XLOC_037614 NA coding downstream 74740 6531549 ~ 6548796 (-)
XLOC_037612 nck2a coding downstream 121045 6393368 ~ 6502491 (-)
XLOC_037613 FQ377643.1 coding downstream 214265 6409157 ~ 6409271 (-)
XLOC_037611 ecrg4a coding downstream 242883 6371919 ~ 6380653 (-)
XLOC_037617 pou3f3a coding upstream 33931 6658594 ~ 6661666 (-)
XLOC_037618 BX842683.1 coding upstream 93014 6717677 ~ 6717801 (-)
XLOC_037619 tmem182a coding upstream 290948 6915611 ~ 6927587 (-)
XLOC_037620 slc9a2 coding upstream 338376 6963039 ~ 6991650 (-)
XLOC_037621 coa5 coding upstream 456914 7081577 ~ 7089303 (-)
XLOC_037602 NA non-coding downstream 1756097 4866100 ~ 4867439 (-)
XLOC_037598 FP102171.1 non-coding downstream 2176432 4443918 ~ 4447104 (-)
XLOC_037589 NA non-coding downstream 3228015 3358397 ~ 3395521 (-)
XLOC_037626 BX942813.1 non-coding upstream 733156 7357819 ~ 7359484 (-)
XLOC_037631 NA non-coding upstream 874597 7499260 ~ 7505531 (-)
XLOC_037636 NA non-coding upstream 1317106 7941769 ~ 7942597 (-)
XLOC_037637 NA non-coding upstream 1535678 8160341 ~ 8163995 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000037_02279319_02280446 GPR45 coding CI01000037 null 2279158 ~ 2280756 (+)