XLOC_003864 (CT033790.2)


Basic Information

Item Value
gene id XLOC_003864
gene name CT033790.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 4299091 ~ 4302567 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007421
CTACAAACGAGATAATTTGGCGAGAAATAACGAACTACCGATGGATTTCTGCCAGAATCAAGAATCAAACATGATGACCAACAACAACACAAGAAGATTGTTCCAGCGGTTCTCCAAATATCAAGGACTTGCAGTTGTTCTTGATGAGGAGGAGGACGCTCTATTCAGAGCTAGTCCAGCCGCTTTCAAAGTGTCTAAGACTGCCTCTGAGAATAACCAGATTTCTCAGGTTGAGAGTGTTTCTCCAAAAGACACTTTCTCTGGGAACGACGGTGTCTCTGTGGTAGTTTTCCTACATGAGAGTGATGGTGTCTCTGAGACGTTTCTTTGCTCTGAGACTGACACCTCCTCTCCGACAAACCGTGTCTCTGTGATGGACACCTTCTCTGAGATTGACTCTGTCTCTCAGATTGAAGGTGTTGCTCCAGTGGACACTTTCTCTGAGACTGATGATGTCTCTCCAACTGATGGTGTTCCTCCAATGGACACCTTTTATGAAACTGAAGCTGTCTCTCAGATTGATGGTGTGCCTTTAACGCACACTGTCTCTGAGACTGACACTGTCTCTCAGATCGATAGAGTTCCTATTATGGACACTTTCTCTGAGATTGACTCTGTCACACATCACAACCAATACCCACCCAGCACAAGTAAGATGTACTCTTACTTTGAGTATCGCAGGAAGAAAGCTGACCCTACAAACACAAGAAGACTGATTCAGCGTTTTTCTGAATATCAAGGACTTGCAGTTGTTCTTGATGAGGAAGAAGATGATATATTCAGGGCGAGTCCAGCTTTCAAAGTGTCTAAGACTGCCTCTGAGACTAACCAGATTTCTCAGATTGAGAGTGTTTCTCCAAAAGACACTTTCTCTGAGAATGACGGCGTCTCTCAGGGTGATGGTGTGCCTTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000112855

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007421 True 912 lncRNA 0.45 6 4299091 4302567

Neighbor

gene id symbol gene type direction distance location
XLOC_003862 BX248331.4 coding downstream 8995 4286630 ~ 4290096 (-)
XLOC_003861 BX248331.1 coding downstream 13081 4283014 ~ 4286010 (-)
XLOC_003860 NA coding downstream 17397 4264048 ~ 4281694 (-)
XLOC_003859 FAM107A coding downstream 63280 4205567 ~ 4235811 (-)
XLOC_003858 BX248331.2 coding downstream 104394 4187022 ~ 4194697 (-)
XLOC_003865 NA coding upstream 6709 4309276 ~ 4350341 (-)
XLOC_003866 NA coding upstream 47911 4350478 ~ 4353433 (-)
XLOC_003867 NA coding upstream 132706 4435273 ~ 4470674 (-)
XLOC_003868 NA coding upstream 189900 4492467 ~ 4931999 (-)
XLOC_003869 NA coding upstream 507148 4809715 ~ 4852148 (-)
XLOC_003938 BX324177.10 misc upstream 7036237 11338804 ~ 11339100 (-)
XLOC_003942 BX324177.17 misc upstream 7065027 11367594 ~ 11367890 (-)
XLOC_003943 BX324177.3 misc upstream 7067888 11370455 ~ 11370653 (-)
XLOC_003944 BX324177.4 misc upstream 7078337 11380904 ~ 11381204 (-)
XLOC_003945 BX324177.6 misc upstream 7081266 11383833 ~ 11384130 (-)
XLOC_003853 CR450797.1 non-coding downstream 345254 3953723 ~ 3953837 (-)
XLOC_003843 NA non-coding downstream 804127 3385104 ~ 3494964 (-)

Expression


Co-expression Network