XLOC_003853 (CR450797.1)



Basic Information


Item Value
gene id XLOC_003853
gene name CR450797.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 3953723 ~ 3953837 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00007400
gccggcagctagctctctgcaactcgcACATGGTCGCCCTCTGAAGcaaagcagggctgcgcccggtgagtacttggatgggagatcacatgggaaagctagctggctgccggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000112857

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00007400 True 115 rRNA 0.61 1 3953723 3953837

Neighbor


gene id symbol gene type direction distance location
XLOC_003851 rpn1 coding downstream 45786 3892386 ~ 3907937 (-)
XLOC_003850 gata2a coding downstream 88251 3847442 ~ 3865472 (-)
XLOC_003849 itih1 coding downstream 306709 3630627 ~ 3647014 (-)
XLOC_003848 itih3a coding downstream 324507 3614326 ~ 3629216 (-)
XLOC_003847 dnajc16l coding downstream 340165 3593127 ~ 3613558 (-)
XLOC_003854 glt8d1 coding upstream 17879 3971716 ~ 3987885 (-)
XLOC_003855 nek4 coding upstream 38074 3991911 ~ 4024087 (-)
XLOC_003856 BX571768.1 coding upstream 84203 4038040 ~ 4137242 (-)
XLOC_003857 ccdc3b coding upstream 194971 4148808 ~ 4175773 (-)
XLOC_003858 BX248331.2 coding upstream 233185 4187022 ~ 4194697 (-)
XLOC_003938 BX324177.10 misc upstream 7384967 11338804 ~ 11339100 (-)
XLOC_003942 BX324177.17 misc upstream 7413757 11367594 ~ 11367890 (-)
XLOC_003943 BX324177.3 misc upstream 7416618 11370455 ~ 11370653 (-)
XLOC_003944 BX324177.4 misc upstream 7427067 11380904 ~ 11381204 (-)
XLOC_003945 BX324177.6 misc upstream 7429996 11383833 ~ 11384130 (-)
XLOC_003843 NA non-coding downstream 458759 3385104 ~ 3494964 (-)
XLOC_003838 NA non-coding downstream 971341 2976603 ~ 2982382 (-)
XLOC_003837 NA non-coding downstream 1109840 2842098 ~ 2843883 (-)
XLOC_003835 NA non-coding downstream 1193357 2756893 ~ 2760366 (-)
XLOC_003826 NA non-coding downstream 1505209 2446641 ~ 2448514 (-)
XLOC_003860 NA non-coding upstream 310211 4264048 ~ 4281694 (-)
XLOC_003862 BX248331.4 non-coding upstream 332793 4286630 ~ 4290096 (-)
XLOC_003864 CT033790.2 non-coding upstream 345254 4299091 ~ 4302567 (-)
XLOC_003865 NA non-coding upstream 355439 4309276 ~ 4350341 (-)

Expression



Co-expression Network