G1984507


Basic Information

Item Value
gene id G1984507
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 42682595 ~ 42683324 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2268911
tcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtattcatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtgccagtgtatttatccctgtctctctgtaccagtgtatgtatccctgtttcctgtctctctgtgccagtgtatttatccctgtctctctgtaccagtgtatttatccctgtgtttcctgtatctctgtaccagtgtatttatccctgtgtttcctgtatctctgtaccagtgtatttatcccggtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2268911 True 441 lncRNA 0.44 2 42682595 42683324

Neighbor

gene id symbol gene type direction distance location
LOC118944289 NA coding upstream 40971 42637762 ~ 42641624 (+)
LOC110506000 NA coding upstream 49471 42491973 ~ 42633124 (+)
cn112 cn112 coding upstream 228588 42419107 ~ 42454007 (+)
LOC110504277 LOC105025529 coding upstream 264553 42284746 ~ 42418042 (+)
LOC110505975 dcaf5 coding upstream 412529 42237295 ~ 42270066 (+)
LOC110505985 lgmn coding downstream 1708 42685032 ~ 42701955 (+)
LOC110505988 chp1 coding downstream 24340 42707664 ~ 42715733 (+)
LOC110505989 NA coding downstream 39376 42722700 ~ 42728639 (+)
LOC110505990 LOC106611473 coding downstream 55911 42739235 ~ 42747065 (+)
LOC110504284 LOC106611474 coding downstream 67185 42750509 ~ 42767350 (+)
G1984489 NA non-coding upstream 40114 42641943 ~ 42642481 (+)
G1984488 NA non-coding upstream 54531 42627189 ~ 42628064 (+)
G1984317 NA non-coding upstream 213519 42467990 ~ 42469076 (+)
G1984308 NA non-coding upstream 260296 42421931 ~ 42422299 (+)
G1984253 NA non-coding upstream 263773 42418353 ~ 42418822 (+)
G1984414 NA non-coding downstream 34251 42717575 ~ 42720010 (+)
G1984416 NA non-coding downstream 45542 42728866 ~ 42729389 (+)
G1984424 NA non-coding downstream 46162 42729486 ~ 42729832 (+)
G1984408 NA non-coding downstream 46400 42729724 ~ 42731100 (+)
G1983836 NA other upstream 419881 42262227 ~ 42262714 (+)
G1983777 NA other upstream 449691 42232240 ~ 42232904 (+)
G1983721 NA other upstream 578699 42063025 ~ 42103896 (+)
LOC110505959 LOC106611457 other upstream 940996 41740173 ~ 41757394 (+)
G1984581 NA other downstream 284092 42964604 ~ 42975274 (+)
G1984431 NA other downstream 359357 43042681 ~ 43043318 (+)
G1984764 NA other downstream 788232 43471556 ~ 43472009 (+)
G1984797 NA other downstream 890719 43574043 ~ 43574613 (+)

Expression


Co-expression Network