Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944569 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 41910803 ~ 41911004 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOC569167 protein, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118944569 | True | 202 | mRNA | 0.46 | 1 | 41910803 | 41911004 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506831 | NA | coding | downstream | 15508 | 41891935 ~ 41895295 (-) |
| LOC118944570 | NA | coding | downstream | 17558 | 41893131 ~ 41893245 (-) |
| LOC110506142 | LOC106562525 | coding | downstream | 47871 | 41827548 ~ 41862932 (-) |
| LOC110506143 | LOC106562454 | coding | downstream | 130935 | 41755021 ~ 41779868 (-) |
| LOC118944455 | lysm2 | coding | downstream | 172710 | 41723275 ~ 41738093 (-) |
| LOC110506839 | NA | coding | upstream | 73634 | 41984638 ~ 41986095 (-) |
| LOC110506148 | LOC106587747 | coding | upstream | 75281 | 41986285 ~ 42056568 (-) |
| LOC110506147 | bend2 | coding | upstream | 156728 | 42067732 ~ 42070472 (-) |
| LOC118944459 | tubgcp4 | coding | upstream | 207417 | 42118421 ~ 42138004 (-) |
| LOC110506841 | cart | coding | upstream | 236760 | 42147360 ~ 42148871 (-) |
| G2030942 | NA | non-coding | downstream | 5727 | 41890181 ~ 41905076 (-) |
| G2030937 | NA | non-coding | downstream | 7731 | 41887698 ~ 41903072 (-) |
| G2030831 | NA | non-coding | downstream | 44483 | 41866019 ~ 41866320 (-) |
| G2030830 | NA | non-coding | downstream | 46469 | 41864096 ~ 41864334 (-) |
| G2030784 | NA | non-coding | downstream | 86762 | 41823533 ~ 41824041 (-) |
| G2030982 | NA | non-coding | upstream | 63251 | 41974255 ~ 41977636 (-) |
| G2030984 | NA | non-coding | upstream | 67490 | 41978494 ~ 41978943 (-) |
| G2031004 | NA | non-coding | upstream | 120778 | 42031782 ~ 42032359 (-) |
| G2031017 | NA | non-coding | upstream | 149874 | 42060878 ~ 42061560 (-) |
| G2031029 | NA | non-coding | upstream | 183629 | 42094633 ~ 42094991 (-) |
| LOC110515873 | LOC106562546 | other | downstream | 342890 | 41461857 ~ 41567947 (-) |
| G2030291 | NA | other | downstream | 698951 | 41211477 ~ 41211852 (-) |
| G2030156 | NA | other | downstream | 1003610 | 40906623 ~ 40907193 (-) |
| G2030162 | NA | other | downstream | 1011782 | 40898470 ~ 40899021 (-) |
| G2030157 | NA | other | downstream | 1022119 | 40887603 ~ 40888684 (-) |
| LOC118944568 | LOC106562433 | other | upstream | 305435 | 42214901 ~ 42217502 (-) |
| G2031225 | NA | other | upstream | 432278 | 42343282 ~ 42346725 (-) |
| G2031259 | NA | other | upstream | 457250 | 42368254 ~ 42369909 (-) |
| G2031286 | LOC106562727 | other | upstream | 548253 | 42459257 ~ 42461315 (-) |
