G2031286 (LOC106562727)


Basic Information

Item Value
gene id G2031286
gene name LOC106562727
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 42459257 ~ 42461315 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2323433
GTTACTGCACAGGTATAAGAGCAAATTAATATAAATTGTTACCCAAAACACATACATCAATAGATAGAAATACATtgatagatttaaaaaaaatactatattttAGAAGcaaaacacaaatataaatgttaTGATCTAGATATTATTTTGCCACATAAATACAATATGGAACAATATGTAGTTTTATACATCTTAGGTATGAGAAGAAAGTAAAGTGTCACATTTATTTTGACATAGAGTGACTGAACTGTTAGCAGTCCTGGGGAGTAGTTCCACTACATTTAATTCAGTTAGTCATTTACCTAGATTTTGTAGTAACTACATTCAAATCTTTGAAGTGTCTTTGGTAGTTAATTACTTGTTTTAGCCATGTAGCTATCTACTGGAACTGCCCACTACATTCATTCAACTCCCCCCTATTTATTTATCTCTCCCTGGCCACTGGGCTAAGCCAAAGCACTCACTCTGACTGTCACACAGATATCACTACactgttaacatctgactccagagtgatGTGTTCTTGCACTCATTTTTCTTAACTGTGTAGTcgatgacatttcagatttagatatgatAGTTTTTTACAAAGTAGTTtgtatgtagtgaactactttgtTAAAGTAACTATTAAAGTCAACTATATTTTTCTTTAGGGTAGCgtattcaatcagatccgctttagccgACATCCGCATAGCAGTTGTTCAGGcagtgtcggaggtggaactgcgttagagcAGATCCTGGCATTATACCTGAAGGGGACATTGCTATTGGCTGCACGGAGTCGCATTAAGAGAAATCTCATGCGAGCCTTATTTACAAGTTCGAAACACAGAATGTGAGATGTGATCTACACCTCGATTCagctgatagaaatcctcattattttctttaggctAATGATATTCAATTTGAGagtcattatttctatatagcctacactttgtCATTCTGAATATCTAACTTGAGTGACAATGATGAAGAGTAGCTCTTCACCaatttgacagctccaacacaGTTACATCTCCGGCACCgtcaaaacatcagctatgcaGGTGTCTGCTATCGCcggttaacgcttgatctgattgaatctaggccgaAGTGTAGCTTAAcctcttccagtgtgaagtaattgatACAAGCTATAAACTATATTTTCatagtagcttccccaacactgccTGTTAGTAACCCAGACAGATAGTTATAGTCAGTTATCTAGTTAGCAAAgggaacaaaacaaaacacaaacgCTTGGCCATTGAAGTGGATATATTCTTCTCTGGTAAGTTTAAAGGTGGGTGATAACGTCCACCTAAAGTGCTATACTTTGTGAGCTGGTCAGCTTTTGCATTGCTCTTTGAGGGCTTTGCCTTCTTACCACAGTGACTGACAGATCTACTGGGTCACCCTGAGTATAGTCTCTTCCCAGGGTTCAACTAGTATTTGCCTCCGCCATTTTCAGTTCCCCCATTTTGGAATTCTAGTGGTTCTattgctctctgtgtgtcttttgaAGGGCCAGAGGCAGGAAGTTGTTGCTTAGGGGTGTATGGGATTTTAATGTCACACATAGACTCACACATGCAGCCCCATTGTTTGTCGGATTCACCATCAGAAGTGCTCAGTCTTGGGGAGTGTTAAGGAGTCATGACAGTCAAAGTATGTGTGCATCTAGGTGTGCACGTGTATACTGTACATCTCTATGTCTAGGCATAGCCGCCTCTCAGTTCCGCAGGTGGCCTGGGCCCTCTGTTACTACACAGATCCTCCAGGGGGCGCAACAGAGcgtcctctctaggtttataggGTATTGCGTAGCTGTCCTCCTCCATCAGTATCCGGTTCAACGTCTGCTCGTTGTTAATGTGGCGACGCACCATCAGTACATACTGGCGCCCTTCCTCCAGAGGGGGGCAGTCACACACGTTGGGCACCCACAGGAACTCGCGGTGCTCCAGGCGGAAGCGATTGTGGTAGGTGTGGATGATCTGGACATCGTAGCGCGTCTCCTCGCCCCGGTACAGCTTGCTCATGACTTTGGCACGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2323433 True 2059 TUCP 0.42 1 42459257 42461315

Neighbor

gene id symbol gene type direction distance location
LOC118944568 LOC106562433 coding downstream 241755 42214901 ~ 42217502 (-)
LOC110506841 cart coding downstream 310391 42147360 ~ 42148871 (-)
LOC118944459 tubgcp4 coding downstream 321253 42118421 ~ 42138004 (-)
LOC110506147 bend2 coding downstream 388785 42067732 ~ 42070472 (-)
LOC110506148 LOC106587747 coding downstream 402689 41986285 ~ 42056568 (-)
LOC110506162 serinc4 coding upstream 1266 42462581 ~ 42509613 (-)
LOC110506854 mfap1 coding upstream 50965 42512280 ~ 42516373 (-)
LOC110526670 NA coding upstream 63266 42524581 ~ 42526465 (-)
LOC110518657 LOC106587629 coding upstream 87034 42548349 ~ 42551080 (-)
LOC110526673 LOC106562627 coding upstream 89897 42551212 ~ 42554509 (-)
G2031307 NA non-coding downstream 466 42458567 ~ 42458791 (-)
G2031306 NA non-coding downstream 746 42458159 ~ 42458511 (-)
G2031227 NA non-coding downstream 1337 42456845 ~ 42457920 (-)
G2031281 NA non-coding downstream 40402 42417395 ~ 42418855 (-)
G2031280 NA non-coding downstream 42417 42416546 ~ 42416840 (-)
G2031287 NA non-coding upstream 661 42461976 ~ 42462363 (-)
G2031309 NA non-coding upstream 9354 42470669 ~ 42487634 (-)
G2031318 NA non-coding upstream 46801 42508116 ~ 42508347 (-)
G2031323 NA non-coding upstream 62555 42523870 ~ 42524088 (-)
G2031342 NA non-coding upstream 96037 42557352 ~ 42557581 (-)
G2031259 NA other downstream 89348 42368254 ~ 42369909 (-)
G2031225 NA other downstream 112532 42343282 ~ 42346725 (-)
LOC110515873 LOC106562546 other downstream 891344 41461857 ~ 41567947 (-)
G2031343 NA other upstream 96482 42557797 ~ 42558903 (-)
LOC110513924 rasl12 other upstream 154929 42616181 ~ 42958849 (-)
G2031974 NA other upstream 723321 43184636 ~ 43185724 (-)
LOC110506858 LOC106562715 other upstream 730383 43180007 ~ 43198177 (-)
G2032150 NA other upstream 1107845 43569160 ~ 43570054 (-)

Expression


Co-expression Network